Conservation of cofitness between GFF4300 and GFF3257 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4300 Proline-specific permease proY 1.0 GFF3257 hemimethylated DNA binding protein YccV 0.54 2
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.92 EX28DRAFT_1977 hemimethylated DNA binding domain low > 76
Klebsiella michiganensis M5al 0.89 BWI76_RS06245 proline-specific permease ProY 0.89 BWI76_RS10040 heat-shock protein HspQ low > 92
Enterobacter sp. TBS_079 0.88 MPMX20_00989 Proline-specific permease ProY 0.93 MPMX20_01616 Heat shock protein HspQ low > 85
Escherichia coli ECOR38 0.87 HEPCGN_07170 proY proline-specific permease ProY 0.93 HEPCGN_23330 hspQ heat shock protein HspQ low > 87
Escherichia coli ECRC99 0.87 KEDOAH_19435 proY proline-specific permease ProY 0.93 KEDOAH_22545 hspQ heat shock protein HspQ
Escherichia coli BW25113 0.87 b0402 proY predicted cryptic proline transporter (NCBI) 0.93 b0966 hspQ DNA-binding protein, hemimethylated (RefSeq) low > 76
Escherichia coli ECRC62 0.87 BNILDI_22875 proY proline-specific permease ProY 0.93 BNILDI_19910 hspQ heat shock protein HspQ low > 75
Escherichia coli ECRC98 0.87 JDDGAC_12185 proY proline-specific permease ProY 0.93 JDDGAC_08800 hspQ heat shock protein HspQ low > 86
Escherichia coli ECRC100 0.87 OKFHMN_08530 proY proline-specific permease ProY 0.93 OKFHMN_05190 hspQ heat shock protein HspQ low > 80
Escherichia coli ECRC102 0.87 NIAGMN_06585 proY proline-specific permease ProY 0.93 NIAGMN_02910 hspQ heat shock protein HspQ
Escherichia coli Nissle 1917 0.87 ECOLIN_RS02425 proline-specific permease ProY 0.93 ECOLIN_RS05080 heat shock protein HspQ low > 55
Escherichia fergusonii Becca 0.87 EFB2_03655 Proline-specific permease ProY 0.93 EFB2_03105 Heat shock protein HspQ low > 86
Escherichia coli ECOR27 0.87 NOLOHH_01460 proY proline-specific permease ProY 0.93 NOLOHH_21745 hspQ heat shock protein HspQ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_03274 Proline-specific permease ProY 0.93 OHPLBJKB_02700 Heat shock protein HspQ low > 73
Escherichia coli ECRC101 0.87 MCAODC_27755 proY proline-specific permease ProY 0.93 MCAODC_24580 hspQ heat shock protein HspQ low > 87
Escherichia coli BL21 0.87 ECD_00350 proline-specific permease 0.93 ECD_00970 heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein low > 61
Pantoea sp. MT58 0.80 IAI47_14830 proline-specific permease ProY 0.71 IAI47_12600 heat shock protein HspQ low > 76
Dickeya dianthicola ME23 0.80 DZA65_RS05835 proline-specific permease ProY 0.64 DZA65_RS16100 heat shock protein HspQ low > 75
Dickeya dianthicola 67-19 0.79 HGI48_RS05510 proline-specific permease ProY 0.64 HGI48_RS15275 heat shock protein HspQ low > 71
Rahnella sp. WP5 0.79 EX31_RS22070 proline-specific permease ProY 0.72 EX31_RS17995 heat shock protein HspQ low > 89
Serratia liquefaciens MT49 0.77 IAI46_04800 proline-specific permease ProY 0.82 IAI46_08920 heat shock protein HspQ low > 86
Pectobacterium carotovorum WPP14 0.77 HER17_RS16015 proline-specific permease ProY 0.61 HER17_RS08465 heat shock protein HspQ low > 75
Dickeya dadantii 3937 0.74 DDA3937_RS05450 proline-specific permease ProY 0.64 DDA3937_RS15200 heat shock protein HspQ low > 74
Rhodopseudomonas palustris CGA009 0.08 TX73_003040 amino acid permease 0.25 TX73_013835 heat shock protein HspQ low > 86

Not shown: 20 genomes with orthologs for GFF4300 only; 0 genomes with orthologs for GFF3257 only