Conservation of cofitness between GFF4401 and GFF3164 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4401 Cys-tRNA(Pro) deacylase YbaK 1.0 GFF3164 Putative inner membrane protein 0.40 18
Escherichia coli Nissle 1917 0.91 ECOLIN_RS02850 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.76 ECOLIN_RS17600 OB-fold-containig protein — —
Escherichia fergusonii Becca 0.91 EFB2_03577 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.75 EFB2_00761 Inner membrane protein YqiJ low > 86
Escherichia coli BW25113 0.91 b0481 ybaK hypothetical protein (NCBI) 0.77 b3050 yqiJ predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECOR27 0.91 NOLOHH_01035 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.77 NOLOHH_10550 yqiJ Inner membrane protein YqiJ low > 75
Escherichia coli ECOR38 0.91 HEPCGN_06725 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.77 HEPCGN_17620 yqiJ Inner membrane protein YqiJ low > 87
Escherichia coli BL21 0.91 ECD_00432 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase 0.77 ECD_02920 DUF1449 family inner membrane protein low > 61
Escherichia coli ECRC62 0.91 BNILDI_22455 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.77 BNILDI_00965 yqiJ Inner membrane protein YqiJ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_03193 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.77 OHPLBJKB_00655 Inner membrane protein YqiJ low > 73
Escherichia coli ECRC102 0.90 NIAGMN_06155 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.77 NIAGMN_16530 yqiJ Inner membrane protein YqiJ — —
Escherichia coli ECRC100 0.90 OKFHMN_08105 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.77 OKFHMN_18765 yqiJ Inner membrane protein YqiJ low > 80
Escherichia coli ECRC101 0.90 MCAODC_27325 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.77 MCAODC_09280 yqiJ Inner membrane protein YqiJ low > 87
Escherichia coli ECRC99 0.90 KEDOAH_19865 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.77 KEDOAH_09380 yqiJ Inner membrane protein YqiJ — —
Escherichia coli ECRC98 0.90 JDDGAC_11750 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.77 JDDGAC_22400 yqiJ Inner membrane protein YqiJ low > 86
Shewanella sp. ANA-3 0.56 Shewana3_0957 ybaK/ebsC protein (RefSeq) 0.24 Shewana3_2997 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.54 SO1124 conserved hypothetical protein TIGR00011 (NCBI ptt file) 0.24 SO1376 conserved hypothetical protein (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.50 MIT1002_01641 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.26 MIT1002_02503 Inner membrane protein YqiJ low > 70
Shewanella amazonensis SB2B 0.50 Sama_0531 YbaK/EbsC protein (RefSeq) 0.24 Sama_0803 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.43 Shew_0016 ybaK/ebsC protein (RefSeq) 0.22 Shew_0945 hypothetical protein (RefSeq) — —
Rhizobium sp. OAE497 0.36 ABIE40_RS01230 Cys-tRNA(Pro) deacylase 0.18 ABIE40_RS13800 OB-fold-containig protein low > 107
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS03340 membrane protein 0.25 RR42_RS14820 hypothetical protein low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF288 Transcriptional regulator 0.16 GFF1955 hypothetical protein — —

Not shown: 62 genomes with orthologs for GFF4401 only; 0 genomes with orthologs for GFF3164 only