Conservation of cofitness between GFF2850 and GFF22 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) 1.0 GFF22 Methionine ABC transporter permease protein 0.69 6
Escherichia coli ECRC98 0.82 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.84 JDDGAC_13650 metI D-methionine transport system permease protein MetI low > 86
Escherichia coli ECRC100 0.82 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.84 OKFHMN_10055 metI D-methionine transport system permease protein MetI — —
Escherichia coli ECRC102 0.82 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.84 NIAGMN_07905 metI D-methionine transport system permease protein MetI — —
Escherichia coli ECRC99 0.82 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.84 KEDOAH_18100 metI D-methionine transport system permease protein MetI — —
Escherichia coli ECOR27 0.82 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.84 NOLOHH_02400 metI D-methionine transport system permease protein MetI — —
Escherichia coli ECRC62 0.82 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.84 BNILDI_09270 metI D-methionine transport system permease protein MetI low > 75
Escherichia coli BL21 0.82 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent 0.84 ECD_00197 DL-methionine transporter subunit — —
Escherichia coli ECOR38 0.82 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.84 HEPCGN_07995 metI D-methionine transport system permease protein MetI low > 87
Escherichia coli BW25113 0.82 b1835 yebU putative nucleolar proteins (VIMSS) 0.84 b0198 metI DL-methionine transporter subunit (NCBI) low > 76
Escherichia fergusonii Becca 0.81 EFB2_02166 Ribosomal RNA small subunit methyltransferase F 0.84 EFB2_03845 D-methionine transport system permease protein MetI low > 86
Escherichia coli ECRC101 0.81 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.84 MCAODC_00570 metI D-methionine transport system permease protein MetI low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F 0.84 OHPLBJKB_03463 D-methionine transport system permease protein MetI low > 73
Escherichia coli Nissle 1917 0.81 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.84 ECOLIN_RS01090 methionine ABC transporter permease MetI — —
Enterobacter asburiae PDN3 0.75 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase 0.86 EX28DRAFT_3786 ABC-type metal ion transport system, permease component low > 76
Enterobacter sp. TBS_079 0.73 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F 0.86 MPMX20_00882 D-methionine transport system permease protein MetI low > 85
Klebsiella michiganensis M5al 0.70 BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.85 BWI76_RS05360 methionine ABC transporter permease low > 92
Pantoea sp. MT58 0.65 IAI47_08680 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.81 IAI47_15390 methionine ABC transporter permease MetI low > 76
Serratia liquefaciens MT49 0.64 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.81 IAI46_20080 methionine ABC transporter permease MetI low > 86
Rahnella sp. WP5 0.62 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.80 EX31_RS12885 methionine ABC transporter permease MetI low > 89
Pectobacterium carotovorum WPP14 0.61 HER17_RS11715 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.81 HER17_RS04375 methionine ABC transporter permease MetI low > 75
Dickeya dadantii 3937 0.61 DDA3937_RS11990 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.80 DDA3937_RS16850 methionine ABC transporter permease MetI low > 74
Dickeya dianthicola 67-19 0.60 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.79 HGI48_RS16920 methionine ABC transporter permease MetI low > 71
Dickeya dianthicola ME23 0.60 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.79 DZA65_RS17995 methionine ABC transporter permease MetI low > 75
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.55 CSW01_04640 methionine ABC transporter permease low > 62

Not shown: 12 genomes with orthologs for GFF2850 only; 48 genomes with orthologs for GFF22 only