| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF4646 | | Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) | 1.0 | GFF1889 | | NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) | 0.77 | 9 |
| Escherichia coli ECRC102 | 0.97 | NIAGMN_04895 | cydA | cytochrome ubiquinol oxidase subunit I | 0.96 | NIAGMN_20620 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia coli ECOR27 | 0.97 | NOLOHH_23280 | cydA | cytochrome ubiquinol oxidase subunit I | 0.96 | NOLOHH_14470 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia coli Nissle 1917 | 0.97 | ECOLIN_RS03900 | | cytochrome ubiquinol oxidase subunit I | 0.96 | ECOLIN_RS13275 | | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia coli BW25113 | 0.97 | b0733 | cydA | cytochrome d terminal oxidase, polypeptide subunit I (VIMSS) | 0.95 | b2286 | nuoC | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | — | — |
| Escherichia coli ECOR38 | 0.97 | HEPCGN_01425 | cydA | cytochrome ubiquinol oxidase subunit I | 0.96 | HEPCGN_22055 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia fergusonii Becca | 0.97 | EFB2_03374 | | Cytochrome bd-I ubiquinol oxidase subunit 1 | 0.96 | EFB2_01573 | | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.97 | OHPLBJKB_02981 | | Cytochrome bd-I ubiquinol oxidase subunit 1 | 0.96 | OHPLBJKB_01420 | | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia coli ECRC101 | 0.97 | MCAODC_26065 | cydA | cytochrome ubiquinol oxidase subunit I | 0.96 | MCAODC_13890 | nuoC | NADH-quinone oxidoreductase subunit C/D | low | > 87 |
| Escherichia coli ECRC62 | 0.97 | BNILDI_21275 | cydA | cytochrome ubiquinol oxidase subunit I | 0.96 | BNILDI_13390 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia coli ECRC99 | 0.97 | KEDOAH_21120 | cydA | cytochrome ubiquinol oxidase subunit I | 0.96 | KEDOAH_05345 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia coli ECRC98 | 0.97 | JDDGAC_10500 | cydA | cytochrome ubiquinol oxidase subunit I | 0.96 | JDDGAC_26815 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Escherichia coli BL21 | 0.97 | ECD_00692 | | cytochrome d terminal oxidase, subunit I | 0.96 | ECD_02211 | | NADH:ubiquinone oxidoreductase, fused CD subunit | — | — |
| Escherichia coli ECRC100 | 0.97 | OKFHMN_06845 | cydA | cytochrome ubiquinol oxidase subunit I | 0.96 | OKFHMN_22850 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Enterobacter asburiae PDN3 | 0.94 | EX28DRAFT_2259 | | Cytochrome bd-type quinol oxidase, subunit 1 | 0.97 | EX28DRAFT_0323 | | NADH (or F420H2) dehydrogenase, subunit C | low | > 76 |
| Enterobacter sp. TBS_079 | 0.94 | MPMX20_01361 | | Cytochrome bd-I ubiquinol oxidase subunit 1 | 0.97 | MPMX20_03216 | | NADH-quinone oxidoreductase subunit C/D | low | > 85 |
| Klebsiella michiganensis M5al | 0.92 | BWI76_RS08495 | | cytochrome bd-I ubiquinol oxidase subunit I | 0.95 | BWI76_RS20180 | | NADH-quinone oxidoreductase subunit C/D | 0.41 | 8 |
| Pantoea sp. MT58 | 0.91 | IAI47_13725 | | cytochrome ubiquinol oxidase subunit I | 0.91 | IAI47_06370 | | NADH-quinone oxidoreductase subunit C/D | low | > 76 |
| Serratia liquefaciens MT49 | 0.90 | IAI46_06295 | | cytochrome ubiquinol oxidase subunit I | 0.92 | IAI46_17700 | | NADH-quinone oxidoreductase subunit C/D | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.88 | HER17_RS14905 | | cytochrome ubiquinol oxidase subunit I | 0.91 | HER17_RS07135 | | NADH-quinone oxidoreductase subunit C/D | low | > 75 |
| Dickeya dianthicola 67-19 | 0.87 | HGI48_RS06520 | | cytochrome ubiquinol oxidase subunit I | 0.89 | HGI48_RS14300 | | NADH-quinone oxidoreductase subunit C/D | — | — |
| Dickeya dianthicola ME23 | 0.87 | DZA65_RS06870 | | cytochrome ubiquinol oxidase subunit I | 0.89 | DZA65_RS14975 | | NADH-quinone oxidoreductase subunit C/D | — | — |
| Dickeya dadantii 3937 | 0.87 | DDA3937_RS06480 | | cytochrome ubiquinol oxidase subunit I | 0.90 | DDA3937_RS14325 | | NADH-quinone oxidoreductase subunit C/D | — | — |
| Erwinia tracheiphila SCR3 | 0.86 | LU632_RS16065 | cydA | cytochrome ubiquinol oxidase subunit I | 0.89 | LU632_RS07975 | nuoC | NADH-quinone oxidoreductase subunit C/D | — | — |
| Rahnella sp. WP5 | 0.86 | EX31_RS23460 | | cytochrome ubiquinol oxidase subunit I | 0.92 | EX31_RS19425 | | NADH-quinone oxidoreductase subunit C/D | 0.72 | 10 |
| Shewanella oneidensis MR-1 | 0.74 | SO3286 | cydA | cytochrome d ubiquinol oxidase, subunit I (NCBI ptt file) | 0.78 | SO1019 | nuoCD | NADH dehydrogenase I, C/D subunits (NCBI ptt file) | low | > 76 |
| Acinetobacter radioresistens SK82 | 0.73 | MPMX26_01623 | | Cytochrome bd ubiquinol oxidase subunit 1 | 0.70 | MPMX26_02553 | | NADH-quinone oxidoreductase subunit C/D | — | — |
| Bacteroides stercoris CC31F | 0.37 | HMPREF1181_RS12460 | | cytochrome ubiquinol oxidase subunit I | 0.21 | HMPREF1181_RS09010 | | NADH-quinone oxidoreductase subunit D | low | > 56 |