Conservation of cofitness between PS417_13140 and PS417_05645 in Pseudomonas simiae WCS417

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_13140 oxidoreductase 1.0 PS417_05645 LuxR family transcriptional regulator 0.18 19
Pseudomonas fluorescens SBW25 0.95 PFLU_RS14200 PQQ-dependent sugar dehydrogenase 1.00 PFLU_RS05730 response regulator transcription factor low > 109
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS14200 PQQ-dependent sugar dehydrogenase 1.00 PFLU_RS05730 response regulator transcription factor low > 109
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_4753 Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-) 0.91 Pf1N1B4_741 DNA-binding response regulator, LuxR family low > 87
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_27715 oxidoreductase 0.90 AO356_18335 LuxR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_801 Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-) 0.91 Pf6N2E2_5592 DNA-binding response regulator, LuxR family low > 103
Pseudomonas sp. RS175 0.78 PFR28_01704 Aldose sugar dehydrogenase YliI 0.91 PFR28_03351 Virulence factors putative positive transcription regulator BvgA low > 88
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_3029 Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-) 0.82 PfGW456L13_1751 DNA-binding response regulator, LuxR family low > 87
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_3771 conserved hypothetical protein 0.92 Psyr_3890 regulatory protein, LuxR:Response regulator receiver low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_3771 conserved hypothetical protein 0.92 Psyr_3890 regulatory protein, LuxR:Response regulator receiver low > 86
Pseudomonas putida KT2440 0.68 PP_2198 aldose sugar dehydrogenase 0.81 PP_1090 putative Virulence factors positive transcription regulator BvgA low > 96
Serratia liquefaciens MT49 0.60 IAI46_08255 PQQ-dependent sugar dehydrogenase 0.35 IAI46_20675 response regulator low > 86
Escherichia coli ECOR27 0.57 NOLOHH_22420 yliI aldose sugar dehydrogenase YliI 0.33 NOLOHH_14110 evgA acid-sensing system DNA-binding response regulator EvgA — —
Escherichia coli ECRC62 0.57 BNILDI_20680 yliI aldose sugar dehydrogenase YliI 0.33 BNILDI_12965 evgA acid-sensing system DNA-binding response regulator EvgA — —
Escherichia coli BL21 0.57 ECD_00804 soluble aldose sugar dehydrogenase 0.33 ECD_02279 response regulator in two-component regulatory system with EvgS — —
Escherichia coli ECRC102 0.56 NIAGMN_04095 yliI aldose sugar dehydrogenase YliI 0.33 NIAGMN_20205 evgA acid-sensing system DNA-binding response regulator EvgA — —
Escherichia coli ECRC99 0.56 KEDOAH_21860 yliI aldose sugar dehydrogenase YliI 0.33 KEDOAH_05795 evgA acid-sensing system DNA-binding response regulator EvgA — —
Escherichia coli ECRC101 0.56 MCAODC_25265 yliI aldose sugar dehydrogenase YliI 0.33 MCAODC_12960 evgA acid-sensing system DNA-binding response regulator EvgA — —
Escherichia coli BW25113 0.56 b0837 yliI predicted dehydrogenase (NCBI) 0.33 b2369 evgA DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) low > 76
Escherichia fergusonii Becca 0.56 EFB2_03269 Aldose sugar dehydrogenase YliI 0.33 EFB2_01505 DNA-binding transcriptional activator EvgA low > 86
Escherichia coli Nissle 1917 0.56 ECOLIN_RS04450 aldose sugar dehydrogenase YliI 0.33 ECOLIN_RS13635 acid-sensing system DNA-binding response regulator EvgA — —
Escherichia coli ECRC98 0.56 JDDGAC_09685 yliI aldose sugar dehydrogenase YliI 0.33 JDDGAC_26390 evgA acid-sensing system DNA-binding response regulator EvgA — —
Escherichia coli ECOR38 0.56 HEPCGN_01980 yliI aldose sugar dehydrogenase YliI 0.34 HEPCGN_21635 evgA acid-sensing system DNA-binding response regulator EvgA low > 85
Escherichia coli ECRC101 0.56 OKFHMN_06050 yliI aldose sugar dehydrogenase YliI 0.33 OKFHMN_22430 evgA acid-sensing system DNA-binding response regulator EvgA — —
Rhizobium sp. OAE497 0.36 ABIE40_RS12945 PQQ-dependent sugar dehydrogenase 0.24 ABIE40_RS22645 response regulator transcription factor low > 107

Not shown: 39 genomes with orthologs for PS417_13140 only; 6 genomes with orthologs for PS417_05645 only