Conservation of cofitness between EX31_RS06155 and EX31_RS12400 in Rahnella sp. WP5

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS06155 ATPase RavA stimulator ViaA 1.0 EX31_RS12400 RNA polymerase factor sigma-54 0.66 7
Serratia liquefaciens MT49 0.64 IAI46_25090 ATPase RavA stimulator ViaA 0.94 IAI46_22470 RNA polymerase factor sigma-54 — —
Enterobacter asburiae PDN3 0.63 EX28DRAFT_4021 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 0.86 EX28DRAFT_3256 RNA polymerase, sigma 54 subunit, RpoN/SigL — —
Pectobacterium carotovorum WPP14 0.63 HER17_RS21580 ATPase RavA stimulator ViaA 0.90 HER17_RS20060 RNA polymerase factor sigma-54 low > 75
Dickeya dianthicola ME23 0.63 DZA65_RS22345 ATPase RavA stimulator ViaA 0.87 DZA65_RS01510 RNA polymerase factor sigma-54 low > 75
Enterobacter sp. TBS_079 0.63 MPMX20_04622 Protein ViaA 0.84 MPMX20_04108 RNA polymerase sigma-54 factor — —
Dickeya dianthicola 67-19 0.62 HGI48_RS21365 ATPase RavA stimulator ViaA 0.87 HGI48_RS01445 RNA polymerase factor sigma-54 low > 71
Dickeya dadantii 3937 0.61 DDA3937_RS00015 ATPase RavA stimulator ViaA 0.88 DDA3937_RS01530 RNA polymerase factor sigma-54 low > 74
Escherichia coli BW25113 0.60 b3745 yieM predicted von Willibrand factor containing protein (NCBI) 0.86 b3202 rpoN DNA-directed RNA polymerase subunit N (NCBI) — —
Escherichia coli ECRC102 0.60 NIAGMN_12520 ravA ATPase RavA 0.86 NIAGMN_15700 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli ECRC100 0.60 OKFHMN_14765 ravA ATPase RavA 0.86 OKFHMN_17940 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli ECRC101 0.60 MCAODC_05270 ravA ATPase RavA 0.86 MCAODC_08460 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli ECRC99 0.60 KEDOAH_13385 ravA ATPase RavA 0.86 KEDOAH_10210 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli ECRC98 0.60 JDDGAC_18385 ravA ATPase RavA 0.86 JDDGAC_21565 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli ECOR27 0.60 NOLOHH_06900 ravA ATPase RavA 0.86 NOLOHH_09740 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli ECRC62 0.60 BNILDI_04625 viaA ATPase RavA stimulator ViaA 0.86 BNILDI_01795 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli Nissle 1917 0.60 ECOLIN_RS21535 ATPase RavA stimulator ViaA 0.86 ECOLIN_RS18425 RNA polymerase factor sigma-54 — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_04308 Protein ViaA 0.86 OHPLBJKB_00498 RNA polymerase sigma-54 factor — —
Escherichia coli BL21 0.60 ECD_03629 stimulator of RavA ATPase activity; von Willebrand factor domain protein 0.86 ECD_03067 RNA polymerase, sigma 54 (sigma N) factor low > 61
Escherichia fergusonii Becca 0.60 EFB2_04888 Protein ViaA 0.86 EFB2_00621 RNA polymerase sigma-54 factor — —
Escherichia coli ECOR38 0.60 HEPCGN_13480 viaA ATPase RavA stimulator ViaA 0.86 HEPCGN_16815 rpoN RNA polymerase factor sigma-54 — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF1712 FIG00637882: hypothetical protein 0.85 GFF2946 RNA polymerase sigma-54 factor RpoN low > 78
Erwinia tracheiphila SCR3 0.59 LU632_RS24830 viaA ATPase RavA stimulator ViaA 0.86 LU632_RS21280 rpoN RNA polymerase factor sigma-54 — —
Klebsiella michiganensis M5al 0.59 BWI76_RS00255 hypothetical protein 0.87 BWI76_RS25265 RNA polymerase factor sigma-54 — —
Pantoea sp. MT58 0.57 IAI47_00320 ATPase RavA stimulator ViaA 0.88 IAI47_17185 RNA polymerase factor sigma-54 low > 76
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_17990 ATPase RavA stimulator ViaA 0.64 CSW01_12815 RNA polymerase sigma-54 factor low > 62

Not shown: 0 genomes with orthologs for EX31_RS06155 only; 71 genomes with orthologs for EX31_RS12400 only