Conservation of cofitness between ECD_01084 and ECD_04088 in Escherichia coli BL21

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01084 DUF177 family protein 1.0 ECD_04088 DUF1107 family protein 0.70 43
Escherichia coli ECOR27 1.00 NOLOHH_21130 yceD 23S rRNA accumulation protein YceD 1.00 NOLOHH_04285 ytfK Uncharacterized protein YtfK low > 75
Escherichia coli ECRC100 1.00 OKFHMN_03600 yceD 23S rRNA accumulation protein YceD 1.00 OKFHMN_12020 ytfK Uncharacterized protein YtfK low > 80
Escherichia coli ECRC102 1.00 NIAGMN_24230 yceD 23S rRNA accumulation protein YceD 1.00 NIAGMN_09870 ytfK Uncharacterized protein YtfK — —
Escherichia coli ECRC99 1.00 KEDOAH_24155 yceD 23S rRNA accumulation protein YceD 1.00 KEDOAH_16135 ytfK Uncharacterized protein YtfK — —
Escherichia coli ECRC101 1.00 MCAODC_22960 yceD 23S rRNA accumulation protein YceD 1.00 MCAODC_02535 ytfK Uncharacterized protein YtfK low > 87
Escherichia coli ECRC98 1.00 JDDGAC_07260 yceD 23S rRNA accumulation protein YceD 1.00 JDDGAC_15660 ytfK Uncharacterized protein YtfK low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS06290 23S rRNA accumulation protein YceD 1.00 ECOLIN_RS24490 DUF1107 domain-containing protein low > 55
Escherichia fergusonii Becca 1.00 EFB2_02887 Large ribosomal RNA subunit accumulation protein YceD 1.00 EFB2_04312 hypothetical protein low > 86
Escherichia coli BW25113 1.00 b1088 yceD hypothetical protein (NCBI) 1.00 b4217 ytfK orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_23880 yceD 23S rRNA accumulation protein YceD 1.00 HEPCGN_10220 ytfK Uncharacterized protein YtfK low > 87
Escherichia coli ECRC62 1.00 BNILDI_19290 yceD 23S rRNA accumulation protein YceD 1.00 BNILDI_07235 ytfK Uncharacterized protein YtfK low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02578 Large ribosomal RNA subunit accumulation protein YceD 1.00 OHPLBJKB_03817 hypothetical protein low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF3370 COG1399 protein, clustered with ribosomal protein L32p 0.97 GFF870 FIG00614015: hypothetical protein low > 78
Enterobacter asburiae PDN3 0.94 EX28DRAFT_1841 Predicted metal-binding, possibly nucleic acid-binding protein 0.97 EX28DRAFT_3403 Protein of unknown function (DUF1107) low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_01768 Large ribosomal RNA subunit accumulation protein YceD 0.98 MPMX20_00494 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.87 BWI76_RS11065 hypothetical protein 0.99 BWI76_RS02745 hypothetical protein — —
Rahnella sp. WP5 0.85 EX31_RS24410 23S rRNA accumulation protein YceD 0.85 EX31_RS08710 DUF1107 domain-containing protein low > 89
Erwinia tracheiphila SCR3 0.84 LU632_RS14845 yceD 23S rRNA accumulation protein YceD 0.88 LU632_RS02095 DUF1107 domain-containing protein low > 74
Pectobacterium carotovorum WPP14 0.84 HER17_RS08625 23S rRNA accumulation protein YceD 0.81 HER17_RS03965 DUF1107 domain-containing protein low > 75
Dickeya dadantii 3937 0.84 DDA3937_RS13145 23S rRNA accumulation protein YceD 0.81 DDA3937_RS17175 DUF1107 domain-containing protein low > 74
Dickeya dianthicola ME23 0.83 DZA65_RS13680 23S rRNA accumulation protein YceD 0.81 DZA65_RS18315 DUF1107 domain-containing protein — —
Dickeya dianthicola 67-19 0.82 HGI48_RS13210 23S rRNA accumulation protein YceD 0.81 HGI48_RS17230 DUF1107 domain-containing protein low > 71
Pantoea sp. MT58 0.79 IAI47_12095 23S rRNA accumulation protein YceD 0.86 IAI47_02705 DUF1107 domain-containing protein — —
Serratia liquefaciens MT49 0.73 IAI46_09765 23S rRNA accumulation protein YceD 0.86 IAI46_01755 DUF1107 domain-containing protein — —
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_10120 23S rRNA accumulation protein YceD 0.52 CSW01_12515 DUF1107 domain-containing protein — —

Not shown: 26 genomes with orthologs for ECD_01084 only; 0 genomes with orthologs for ECD_04088 only