Conservation of cofitness between ECD_03302 and ECD_04008 in Escherichia coli BL21

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03302 sn-glycerol-3-phosphate ABC transporter periplasmic binding protein 1.0 ECD_04008 C4-dicarboxylate antiporter 0.68 3
Escherichia coli ECRC102 1.00 NIAGMN_14540 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 1.00 NIAGMN_10285 dcuA anaerobic C4-dicarboxylate transporter DcuA — —
Escherichia coli ECRC101 1.00 MCAODC_07300 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 1.00 MCAODC_02950 dcuA anaerobic C4-dicarboxylate transporter DcuA — —
Escherichia coli ECRC99 1.00 KEDOAH_11370 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 1.00 KEDOAH_15725 dcuA anaerobic C4-dicarboxylate transporter DcuA — —
Escherichia coli ECRC101 1.00 OKFHMN_16770 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 1.00 OKFHMN_12440 dcuA anaerobic C4-dicarboxylate transporter DcuA — —
Escherichia coli ECRC98 1.00 JDDGAC_20400 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 1.00 JDDGAC_16075 dcuA anaerobic C4-dicarboxylate transporter DcuA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00250 sn-glycerol-3-phosphate-binding periplasmic protein UgpB 1.00 OHPLBJKB_03905 Anaerobic C4-dicarboxylate transporter DcuA low > 73
Escherichia coli BW25113 1.00 b3453 ugpB glycerol-3-phosphate transporter subunit (NCBI) 1.00 b4138 dcuA C4-dicarboxylate antiporter (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_08560 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 1.00 NOLOHH_04705 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 57
Escherichia coli ECRC62 1.00 BNILDI_02945 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 1.00 BNILDI_06785 dcuA anaerobic C4-dicarboxylate transporter DcuA — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS19745 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 1.00 ECOLIN_RS24040 anaerobic C4-dicarboxylate transporter DcuA low > 52
Escherichia fergusonii Becca 0.99 EFB2_00369 sn-glycerol-3-phosphate-binding periplasmic protein UgpB 1.00 EFB2_04397 Anaerobic C4-dicarboxylate transporter DcuA low > 86
Escherichia coli ECOR38 0.99 HEPCGN_15590 ugpB sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 1.00 HEPCGN_10665 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF555 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) 0.92 GFF2014 C4-dicarboxylate transporter DcuA low > 78
Klebsiella michiganensis M5al 0.91 BWI76_RS26305 sn-glycerol-3-phosphate ABC transporter substrate-binding protein 0.58 BWI76_RS02325 anaerobic C4-dicarboxylate transporter low > 92
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4285 ABC-type sugar transport system, periplasmic component 0.58 EX28DRAFT_3335 anaerobic c4-dicarboxylate membrane transporter family protein low > 76
Enterobacter sp. TBS_079 0.90 MPMX20_04329 sn-glycerol-3-phosphate-binding periplasmic protein UgpB 0.58 MPMX20_00418 Anaerobic C4-dicarboxylate transporter DcuA 0.21 41
Pectobacterium carotovorum WPP14 0.85 HER17_RS00610 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 0.57 HER17_RS18840 anaerobic C4-dicarboxylate transporter low > 75
Dickeya dianthicola ME23 0.82 DZA65_RS21665 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 0.59 DZA65_RS02845 anaerobic C4-dicarboxylate transporter low > 75
Dickeya dadantii 3937 0.82 DDA3937_RS00720 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 0.59 DDA3937_RS02715 anaerobic C4-dicarboxylate transporter low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS20650 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 0.59 HGI48_RS02690 anaerobic C4-dicarboxylate transporter low > 71
Rahnella sp. WP5 0.81 EX31_RS14760 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 0.78 EX31_RS08970 anaerobic C4-dicarboxylate transporter low > 89
Serratia liquefaciens MT49 0.81 IAI46_00990 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 0.84 IAI46_01475 anaerobic C4-dicarboxylate transporter low > 86
Pantoea sp. MT58 0.79 IAI47_01590 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 0.57 IAI47_17325 anaerobic C4-dicarboxylate transporter low > 76
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_07785 ABC transporter substrate-binding protein 0.50 CSW01_13625 C4-dicarboxylate ABC transporter low > 62

Not shown: 31 genomes with orthologs for ECD_03302 only; 7 genomes with orthologs for ECD_04008 only