Conservation of cofitness between ECD_03243 and ECD_03848 in Escherichia coli BL21

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03243 DNA catabolic putative fimbrial transporter 1.0 ECD_03848 transcriptional repressor of fabA and fabB 0.69 12
Escherichia coli BW25113 1.00 b3391 hofQ predicted fimbrial transporter (NCBI) 0.91 b3963 fabR DNA-binding transcriptional repressor (RefSeq) 0.51 2
Escherichia coli Nissle 1917 0.98 ECOLIN_RS19370 DNA uptake porin HofQ 0.91 ECOLIN_RS22890 HTH-type transcriptional repressor FabR low > 55
Escherichia coli ECOR27 0.98 NOLOHH_08895 hofQ DNA uptake porin HofQ 1.00 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR low > 75
Escherichia coli ECRC62 0.97 BNILDI_02625 hofQ DNA uptake porin HofQ 1.00 BNILDI_05835 fabR HTH-type transcriptional repressor FabR low > 75
Escherichia coli ECRC102 0.97 NIAGMN_14875 hofQ DNA uptake porin HofQ 1.00 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR — —
Escherichia coli ECRC98 0.97 JDDGAC_20735 hofQ DNA uptake porin HofQ 1.00 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR low > 86
Escherichia coli ECRC100 0.97 OKFHMN_17105 hofQ DNA uptake porin HofQ 1.00 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR low > 80
Escherichia coli ECRC99 0.97 KEDOAH_11035 hofQ DNA uptake porin HofQ 1.00 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR — —
Escherichia coli ECRC101 0.97 MCAODC_07635 hofQ DNA uptake porin HofQ 1.00 MCAODC_04045 fabR HTH-type transcriptional repressor FabR low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_00312 Type IV pilus biogenesis and competence protein PilQ 1.00 OHPLBJKB_04087 HTH-type transcriptional repressor FabR low > 73
Escherichia coli ECOR38 0.96 HEPCGN_15925 hofQ DNA uptake porin HofQ 1.00 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR low > 87
Escherichia fergusonii Becca 0.95 EFB2_00437 Type IV pilus biogenesis and competence protein PilQ 1.00 EFB2_04647 HTH-type transcriptional repressor FabR low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF628 Type IV pilus biogenesis protein PilQ 0.86 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.48 14
Enterobacter asburiae PDN3 0.73 EX28DRAFT_4151 type IV pilus secretin (or competence protein) PilQ 0.86 EX28DRAFT_4426 transcriptional regulator, TetR family low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_04280 Type IV pilus biogenesis and competence protein PilQ 0.86 MPMX20_04517 HTH-type transcriptional repressor FabR low > 85
Klebsiella michiganensis M5al 0.67 BWI76_RS26100 DNA transporter HofQ 0.86 BWI76_RS00875 DNA-binding transcriptional regulator FabR low > 92
Pectobacterium carotovorum WPP14 0.49 HER17_RS01770 DNA uptake porin HofQ 0.82 HER17_RS00965 HTH-type transcriptional repressor FabR low > 75
Pantoea sp. MT58 0.49 IAI47_01885 DNA uptake porin HofQ 0.82 IAI47_00940 HTH-type transcriptional repressor FabR low > 76
Erwinia tracheiphila SCR3 0.49 LU632_RS22875 hofQ DNA uptake porin HofQ 0.82 LU632_RS19580 fabR HTH-type transcriptional repressor FabR low > 74
Dickeya dianthicola ME23 0.48 DZA65_RS20770 DNA uptake porin HofQ 0.82 DZA65_RS21440 HTH-type transcriptional repressor FabR low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS19685 DNA uptake porin HofQ 0.82 HGI48_RS20395 HTH-type transcriptional repressor FabR low > 71
Dickeya dadantii 3937 0.48 DDA3937_RS19555 DNA uptake porin HofQ 0.81 DDA3937_RS00980 HTH-type transcriptional repressor FabR low > 74
Rahnella sp. WP5 0.47 EX31_RS04730 DNA uptake porin HofQ 0.84 EX31_RS14160 HTH-type transcriptional repressor FabR low > 89
Serratia liquefaciens MT49 0.46 IAI46_23715 DNA uptake porin HofQ 0.85 IAI46_24465 HTH-type transcriptional repressor FabR low > 86
Pseudomonas putida KT2440 0.27 PP_5080 type 4 pili biogenesis protein 0.25 PP_4859 Transcriptional regulator, TetR family low > 96
Pseudomonas fluorescens SBW25 0.25 PFLU_RS02020 type IV pilus secretin PilQ family protein 0.23 PFLU_RS02790 TetR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS02020 type IV pilus secretin PilQ family protein 0.23 PFLU_RS02790 TetR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.24 PS417_01975 pilus assembly protein PilQ 0.23 PS417_02720 TetR family transcriptional regulator low > 88

Not shown: 1 genomes with orthologs for ECD_03243 only; 18 genomes with orthologs for ECD_03848 only