Conservation of cofitness between ECD_01288 and ECD_03462 in Escherichia coli BL21

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01288 putative sugar ABC transporter permease 1.0 ECD_03462 dual role activator/repressor for lldPRD operon low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02371 Inner membrane ABC transporter permease protein YcjO 1.00 OHPLBJKB_00095 Putative L-lactate dehydrogenase operon regulatory protein low > 73
Escherichia coli BW25113 0.99 b1311 ycjO predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) 1.00 b3604 lldR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECRC99 0.99 KEDOAH_26410 ugpA sugar ABC transporter permease 1.00 KEDOAH_12375 lldR transcriptional regulator LldR — —
Escherichia coli ECOR27 0.99 NOLOHH_20060 ugpA sugar ABC transporter permease 0.99 NOLOHH_07655 lldR transcriptional regulator LldR low > 75
Escherichia coli ECRC102 0.99 NIAGMN_26535 ugpA sugar ABC transporter permease 1.00 NIAGMN_13535 lldR transcriptional regulator LldR — —
Escherichia fergusonii Becca 0.99 EFB2_02616 Inner membrane ABC transporter permease protein YcjO 0.99 EFB2_00206 Putative L-lactate dehydrogenase operon regulatory protein low > 86
Escherichia coli ECRC100 0.99 OKFHMN_02365 ugpA sugar ABC transporter permease 1.00 OKFHMN_15775 lldR transcriptional regulator LldR low > 80
Escherichia coli ECRC101 0.99 MCAODC_15905 ugpA sugar ABC transporter permease 1.00 MCAODC_06285 lldR transcriptional regulator LldR low > 87
Escherichia coli ECRC62 0.99 BNILDI_18210 ugpA sugar ABC transporter permease 0.99 BNILDI_03860 lldR transcriptional regulator LldR low > 75
Escherichia coli ECRC98 0.99 JDDGAC_04910 ugpA sugar ABC transporter permease 1.00 JDDGAC_19400 lldR transcriptional regulator LldR low > 86
Escherichia coli ECOR38 0.99 HEPCGN_25825 ugpA sugar ABC transporter permease 0.99 HEPCGN_14615 lldR transcriptional regulator LldR low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS07885 sugar ABC transporter permease 0.99 ECOLIN_RS20575 transcriptional regulator LldR low > 55
Enterobacter sp. TBS_079 0.91 MPMX20_02466 Inner membrane ABC transporter permease protein YcjO 0.84 MPMX20_00130 Putative L-lactate dehydrogenase operon regulatory protein low > 85
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0982 ABC-type sugar transport systems, permease components 0.84 EX28DRAFT_3854 Transcriptional regulators low > 76
Pantoea sp. MT58 0.26 IAI47_20095 sugar ABC transporter permease 0.63 IAI47_15025 transcriptional regulator LldR low > 76
Variovorax sp. OAS795 0.25 ABID97_RS29290 sugar ABC transporter permease 0.17 ABID97_RS01955 FadR/GntR family transcriptional regulator low > 91
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS35665 ABC transporter permease 0.27 BPHYT_RS26990 GntR family transcriptional regulator low > 109
Azospirillum brasilense Sp245 0.22 AZOBR_RS25585 ABC transporter permease 0.22 AZOBR_RS25130 GntR family transcriptional regulator low > 97
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS16725 ABC transporter permease 0.20 HSERO_RS21165 GntR family transcriptional regulator low > 78

Not shown: 29 genomes with orthologs for ECD_01288 only; 8 genomes with orthologs for ECD_03462 only