Conservation of cofitness between ECD_03243 and ECD_02938 in Escherichia coli BL21

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03243 DNA catabolic putative fimbrial transporter 1.0 ECD_02938 G/U mismatch-specific DNA glycosylase; xanthine DNA glycosylase 0.55 56
Escherichia coli BW25113 1.00 b3391 hofQ predicted fimbrial transporter (NCBI) 1.00 b3068 ygjF G/U mismatch-specific DNA glycosylase (NCBI) low > 76
Escherichia coli Nissle 1917 0.98 ECOLIN_RS19370 DNA uptake porin HofQ 1.00 ECOLIN_RS17710 G/U mismatch-specific DNA glycosylase low > 55
Escherichia coli ECOR27 0.98 NOLOHH_08895 hofQ DNA uptake porin HofQ 1.00 NOLOHH_10440 mug G/U mismatch-specific DNA glycosylase low > 75
Escherichia coli ECRC62 0.97 BNILDI_02625 hofQ DNA uptake porin HofQ 1.00 BNILDI_01075 mug G/U mismatch-specific DNA glycosylase low > 75
Escherichia coli ECRC98 0.97 JDDGAC_20735 hofQ DNA uptake porin HofQ 0.99 JDDGAC_22285 mug G/U mismatch-specific DNA glycosylase low > 86
Escherichia coli ECRC102 0.97 NIAGMN_14875 hofQ DNA uptake porin HofQ 0.99 NIAGMN_16415 mug G/U mismatch-specific DNA glycosylase — —
Escherichia coli ECRC100 0.97 OKFHMN_17105 hofQ DNA uptake porin HofQ 0.99 OKFHMN_18650 mug G/U mismatch-specific DNA glycosylase low > 80
Escherichia coli ECRC99 0.97 KEDOAH_11035 hofQ DNA uptake porin HofQ 0.99 KEDOAH_09495 mug G/U mismatch-specific DNA glycosylase — —
Escherichia coli ECRC101 0.97 MCAODC_07635 hofQ DNA uptake porin HofQ 0.99 MCAODC_09165 mug G/U mismatch-specific DNA glycosylase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_00312 Type IV pilus biogenesis and competence protein PilQ 0.99 OHPLBJKB_00634 G/U mismatch-specific DNA glycosylase low > 73
Escherichia coli ECOR38 0.96 HEPCGN_15925 hofQ DNA uptake porin HofQ 1.00 HEPCGN_17500 mug G/U mismatch-specific DNA glycosylase low > 87
Escherichia fergusonii Becca 0.95 EFB2_00437 Type IV pilus biogenesis and competence protein PilQ 1.00 EFB2_00743 G/U mismatch-specific DNA glycosylase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF628 Type IV pilus biogenesis protein PilQ 0.84 GFF3178 G:T/U mismatch-specific uracil/thymine DNA-glycosylase low > 78
Enterobacter asburiae PDN3 0.73 EX28DRAFT_4151 type IV pilus secretin (or competence protein) PilQ 0.81 EX28DRAFT_3103 G/U mismatch-specific uracil-DNA glycosylase (EC 3.2.2.-) low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_04280 Type IV pilus biogenesis and competence protein PilQ 0.83 MPMX20_03910 G/U mismatch-specific DNA glycosylase low > 85
Klebsiella michiganensis M5al 0.67 BWI76_RS26100 DNA transporter HofQ 0.74 BWI76_RS24565 mismatch-specific DNA-glycosylase low > 92
Pectobacterium carotovorum WPP14 0.49 HER17_RS01770 DNA uptake porin HofQ 0.63 HER17_RS18420 G/U mismatch-specific DNA glycosylase low > 75
Pantoea sp. MT58 0.49 IAI47_01885 DNA uptake porin HofQ 0.60 IAI47_03045 G/U mismatch-specific DNA glycosylase low > 76
Rahnella sp. WP5 0.47 EX31_RS04730 DNA uptake porin HofQ 0.62 EX31_RS08215 G/U mismatch-specific DNA glycosylase low > 89
Serratia liquefaciens MT49 0.46 IAI46_23715 DNA uptake porin HofQ 0.62 IAI46_22135 G/U mismatch-specific DNA glycosylase low > 86
Pseudomonas fluorescens SBW25 0.25 PFLU_RS02020 type IV pilus secretin PilQ family protein 0.45 PFLU_RS11680 G/U mismatch-specific DNA glycosylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS02020 type IV pilus secretin PilQ family protein 0.45 PFLU_RS11680 G/U mismatch-specific DNA glycosylase low > 109

Not shown: 7 genomes with orthologs for ECD_03243 only; 14 genomes with orthologs for ECD_02938 only