Conservation of cofitness between ECD_02776 and ECD_02882 in Escherichia coli BL21

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02776 16S rRNA m(3)U1498 methyltransferase, SAM-dependent 1.0 ECD_02882 general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter 0.69 25
Escherichia coli ECOR38 1.00 HEPCGN_18585 Ribosomal RNA small subunit methyltransferase E 1.00 HEPCGN_17820 yghB Inner membrane protein YghB low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00772 Ribosomal RNA small subunit methyltransferase E 1.00 OHPLBJKB_00692 Inner membrane protein YghB low > 73
Escherichia coli ECRC100 1.00 OKFHMN_19280 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 1.00 OKFHMN_18955 yghB Inner membrane protein YghB low > 80
Escherichia coli ECRC98 1.00 JDDGAC_22910 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 1.00 JDDGAC_22590 yghB Inner membrane protein YghB low > 86
Escherichia coli ECRC101 1.00 MCAODC_09800 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 1.00 MCAODC_09470 yghB Inner membrane protein YghB low > 87
Escherichia coli ECRC102 1.00 NIAGMN_17045 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 1.00 NIAGMN_16720 yghB Inner membrane protein YghB — —
Escherichia coli ECOR27 1.00 NOLOHH_11150 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 1.00 NOLOHH_10730 yghB Inner membrane protein YghB low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS16390 16S rRNA (uracil(1498)-N(3))-methyltransferase 1.00 ECOLIN_RS17320 DedA family general envelope maintenance protein YghB low > 55
Escherichia coli ECRC99 1.00 KEDOAH_08860 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 1.00 KEDOAH_09190 yghB Inner membrane protein YghB — —
Escherichia coli BW25113 1.00 b2946 yggJ orf, hypothetical protein (VIMSS) 1.00 b3009 yghB conserved inner membrane protein (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_00956 Ribosomal RNA small subunit methyltransferase E 1.00 EFB2_00801 Inner membrane protein YghB low > 86
Escherichia coli ECRC62 1.00 BNILDI_09730 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 1.00 BNILDI_00785 yghB Inner membrane protein YghB low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF3048 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.91 GFF3121 DedA family inner membrane protein YghB low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2984 RNA methyltransferase, RsmE family 0.85 EX28DRAFT_3047 Uncharacterized membrane-associated protein low > 76
Enterobacter sp. TBS_079 0.89 MPMX20_03804 Ribosomal RNA small subunit methyltransferase E 0.86 MPMX20_03853 Inner membrane protein YghB low > 85
Klebsiella michiganensis M5al 0.86 BWI76_RS24070 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.86 BWI76_RS24290 membrane protein low > 92
Rahnella sp. WP5 0.85 EX31_RS02660 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.72 EX31_RS08030 DedA family protein low > 89
Serratia liquefaciens MT49 0.83 IAI46_21385 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.65 IAI46_21730 DedA family protein low > 86
Pantoea sp. MT58 0.82 IAI47_03620 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.74 IAI47_03210 DedA family protein low > 76
Dickeya dadantii 3937 0.81 DDA3937_RS18555 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.69 DDA3937_RS01810 DedA family protein low > 74
Dickeya dianthicola 67-19 0.79 HGI48_RS18490 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.69 HGI48_RS01705 DedA family protein low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS19625 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.69 DZA65_RS01780 DedA family protein low > 75
Erwinia tracheiphila SCR3 0.79 LU632_RS05485 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.70 LU632_RS20550 DedA family protein low > 74
Pectobacterium carotovorum WPP14 0.78 HER17_RS02640 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.68 HER17_RS19695 DedA family protein low > 75
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_02495 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.23 CSW01_16905 DedA family protein low > 62

Not shown: 74 genomes with orthologs for ECD_02776 only; 0 genomes with orthologs for ECD_02882 only