Conservation of cofitness between ECD_03243 and ECD_02642 in Escherichia coli BL21

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03243 DNA catabolic putative fimbrial transporter 1.0 ECD_02642 L-serine dehydratase 2 0.71 11
Escherichia coli BW25113 1.00 b3391 hofQ predicted fimbrial transporter (NCBI) 1.00 b2797 sdaB L-serine deaminase II (NCBI) low > 76
Escherichia coli Nissle 1917 0.98 ECOLIN_RS19370 DNA uptake porin HofQ 1.00 ECOLIN_RS15595 L-serine ammonia-lyase II low > 55
Escherichia coli ECOR27 0.98 NOLOHH_08895 hofQ DNA uptake porin HofQ 1.00 NOLOHH_12055 sdaB L-serine ammonia-lyase II low > 75
Escherichia coli ECRC62 0.97 BNILDI_02625 hofQ DNA uptake porin HofQ 1.00 BNILDI_10560 sdaB L-serine ammonia-lyase II low > 75
Escherichia coli ECRC99 0.97 KEDOAH_11035 hofQ DNA uptake porin HofQ 0.99 KEDOAH_07955 sdaB L-serine ammonia-lyase II — —
Escherichia coli ECRC98 0.97 JDDGAC_20735 hofQ DNA uptake porin HofQ 0.99 JDDGAC_23840 sdaB L-serine ammonia-lyase II low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_00312 Type IV pilus biogenesis and competence protein PilQ 1.00 OHPLBJKB_00934 L-serine dehydratase 2 low > 73
Escherichia coli ECRC102 0.97 NIAGMN_14875 hofQ DNA uptake porin HofQ 0.99 NIAGMN_17945 sdaB L-serine ammonia-lyase II — —
Escherichia coli ECRC100 0.97 OKFHMN_17105 hofQ DNA uptake porin HofQ 0.99 OKFHMN_20175 sdaB L-serine ammonia-lyase II low > 80
Escherichia coli ECRC101 0.97 MCAODC_07635 hofQ DNA uptake porin HofQ 0.99 MCAODC_10700 sdaB L-serine ammonia-lyase II low > 87
Escherichia coli ECOR38 0.96 HEPCGN_15925 hofQ DNA uptake porin HofQ 1.00 HEPCGN_19430 sdaB L-serine ammonia-lyase II low > 87
Escherichia fergusonii Becca 0.95 EFB2_00437 Type IV pilus biogenesis and competence protein PilQ 1.00 EFB2_01120 L-serine dehydratase 2 low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF628 Type IV pilus biogenesis protein PilQ 0.93 GFF4853 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) low > 78
Enterobacter asburiae PDN3 0.73 EX28DRAFT_4151 type IV pilus secretin (or competence protein) PilQ 0.96 EX28DRAFT_2879 L-serine dehydratase, iron-sulfur-dependent, single chain form low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_04280 Type IV pilus biogenesis and competence protein PilQ 0.95 MPMX20_03667 L-serine dehydratase 2 low > 85
Klebsiella michiganensis M5al 0.67 BWI76_RS26100 DNA transporter HofQ 0.92 BWI76_RS22880 L-serine ammonia-lyase low > 92
Rahnella sp. WP5 0.47 EX31_RS04730 DNA uptake porin HofQ 0.76 EX31_RS04215 L-serine ammonia-lyase low > 89
Serratia liquefaciens MT49 0.46 IAI46_23715 DNA uptake porin HofQ 0.80 IAI46_08290 L-serine ammonia-lyase low > 86
Pseudomonas fluorescens SBW25 0.25 PFLU_RS02020 type IV pilus secretin PilQ family protein 0.51 PFLU_RS24005 L-serine ammonia-lyase 0.38 52
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS02020 type IV pilus secretin PilQ family protein 0.51 PFLU_RS24005 L-serine ammonia-lyase low > 109
Pseudomonas simiae WCS417 0.24 PS417_01975 pilus assembly protein PilQ 0.51 PS417_22365 serine dehydratase low > 88
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU1273 bacterial type II/III secretion system protein (TIGR) 0.31 DVU2147 sda L-serine dehydratase, putative (TIGR) low > 55

Not shown: 7 genomes with orthologs for ECD_03243 only; 12 genomes with orthologs for ECD_02642 only