Conservation of cofitness between ECD_00977 and ECD_01886 in Escherichia coli BL21

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00977 hydrogenase 1, b-type cytochrome subunit 1.0 ECD_01886 membrane-anchored, periplasmic TMAO, DMSO reductase 0.34 18
Escherichia coli ECRC102 1.00 NIAGMN_23050 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 NIAGMN_02500 msrP protein-methionine-sulfoxide reductase catalytic subunit MsrP
Escherichia coli ECRC101 1.00 MCAODC_24185 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 MCAODC_19840 msrP protein-methionine-sulfoxide reductase catalytic subunit MsrP
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02692 putative Ni/Fe-hydrogenase 1 B-type cytochrome subunit 0.99 OHPLBJKB_01758 Protein-methionine-sulfoxide reductase catalytic subunit MsrP low > 73
Escherichia coli ECRC62 1.00 BNILDI_19870 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 0.94 BNILDI_14975 msrP protein-methionine-sulfoxide reductase catalytic subunit MsrP
Escherichia coli ECOR38 1.00 HEPCGN_23370 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 HEPCGN_03915 msrP protein-methionine-sulfoxide reductase catalytic subunit MsrP low > 85
Escherichia coli ECRC99 1.00 KEDOAH_22945 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 KEDOAH_02540 msrP protein-methionine-sulfoxide reductase catalytic subunit MsrP
Escherichia coli ECRC101 1.00 OKFHMN_04800 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 OKFHMN_25555 msrP protein-methionine-sulfoxide reductase catalytic subunit MsrP
Escherichia coli ECRC98 1.00 JDDGAC_08410 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 JDDGAC_00140 msrP protein-methionine-sulfoxide reductase catalytic subunit MsrP
Escherichia coli BW25113 1.00 b0974 hyaC hydrogenase 1, b-type cytochrome subunit (NCBI) 0.99 b1971 yedY hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_21705 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 NOLOHH_16185 msrP protein-methionine-sulfoxide reductase catalytic subunit MsrP low > 57
Escherichia fergusonii Becca 0.99 EFB2_03097 putative Ni/Fe-hydrogenase 1 B-type cytochrome subunit 1.00 EFB2_01979 Protein-methionine-sulfoxide reductase catalytic subunit MsrP low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS05120 Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 ECOLIN_RS11200 protein-methionine-sulfoxide reductase catalytic subunit MsrP
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF2789 Ni,Fe-hydrogenase I cytochrome b subunit 0.90 GFF2131 Putative sulfite oxidase subunit YedY low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2227 Ni,Fe-hydrogenase I cytochrome b subunit 0.47 GFF1348 Putative sulfite oxidase subunit YedY low > 90
Variovorax sp. OAS795 0.48 ABID97_RS13670 Ni/Fe-hydrogenase, b-type cytochrome subunit 0.46 ABID97_RS23315 protein-methionine-sulfoxide reductase catalytic subunit MsrP low > 91
Azospirillum sp. SherDot2 0.46 MPMX19_05286 putative Ni/Fe-hydrogenase B-type cytochrome subunit 0.49 MPMX19_05078 Protein-methionine-sulfoxide reductase catalytic subunit MsrP low > 112
Rhodospirillum rubrum S1H 0.44 Rru_A1163 Nickel-dependent hydrogenase b-type cytochrome subunit (NCBI) 0.47 Rru_A0593 Twin-arginine translocation pathway signal (NCBI) low > 58
Shewanella loihica PV-4 0.15 Shew_1763 Ni/Fe-hydrogenase, b-type cytochrome subunit (RefSeq) 0.54 Shew_2123 putative sulfite oxidase subunit YedY (RefSeq) low > 60
Shewanella oneidensis MR-1 0.15 SO2097 hydC quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit (NCBI ptt file) 0.57 SO2042 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.14 Shewana3_1878 Ni/Fe-hydrogenase, b-type cytochrome subunit (RefSeq) 0.58 Shewana3_2234 putative sulfite oxidase subunit YedY (RefSeq) low > 73
Shewanella amazonensis SB2B 0.13 Sama_1677 quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit (RefSeq) 0.57 Sama_1893 putative sulfite oxidase subunit YedY (RefSeq) low > 62

Not shown: 1 genomes with orthologs for ECD_00977 only; 52 genomes with orthologs for ECD_01886 only