Conservation of cofitness between ECD_00346 and ECD_01803 in Escherichia coli BL21

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00346 exonuclease, dsDNA, ATP-dependent 1.0 ECD_01803 free methionine-(R)-sulfoxide reductase 0.67 2
Escherichia coli ECRC99 1.00 KEDOAH_19415 sbcD exonuclease subunit SbcD 1.00 KEDOAH_01650 msrC L-methionine (R)-S-oxide reductase
Escherichia coli ECRC102 1.00 NIAGMN_06605 sbcD exonuclease subunit SbcD 1.00 NIAGMN_01605 msrC L-methionine (R)-S-oxide reductase
Escherichia coli ECRC100 1.00 OKFHMN_08550 sbcD exonuclease subunit SbcD 1.00 OKFHMN_26455 msrC L-methionine (R)-S-oxide reductase low > 80
Escherichia coli ECRC101 1.00 MCAODC_27775 sbcD exonuclease subunit SbcD 1.00 MCAODC_18950 msrC L-methionine (R)-S-oxide reductase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03278 Nuclease SbcCD subunit D 1.00 OHPLBJKB_01899 Free methionine-R-sulfoxide reductase low > 73
Escherichia coli ECRC98 1.00 JDDGAC_12205 sbcD exonuclease subunit SbcD 1.00 JDDGAC_01030 msrC L-methionine (R)-S-oxide reductase low > 86
Escherichia coli BW25113 1.00 b0398 sbcD exonuclease, dsDNA, ATP-dependent (NCBI) 0.89 b1832 yebR free methionine-(R)-sulfoxide reductase (RefSeq) low > 76
Escherichia coli ECRC62 1.00 BNILDI_22895 sbcD exonuclease subunit SbcD 1.00 BNILDI_15760 msrC L-methionine (R)-S-oxide reductase low > 75
Escherichia coli ECOR27 1.00 NOLOHH_01480 sbcD exonuclease subunit SbcD 1.00 NOLOHH_16965 msrC L-methionine (R)-S-oxide reductase low > 75
Escherichia fergusonii Becca 0.99 EFB2_03659 Nuclease SbcCD subunit D 0.99 EFB2_02169 Free methionine-R-sulfoxide reductase low > 86
Escherichia coli ECOR38 0.99 HEPCGN_07190 sbcD exonuclease subunit SbcD 0.98 HEPCGN_04855 msrC L-methionine (R)-S-oxide reductase low > 87
Enterobacter asburiae PDN3 0.84 EX28DRAFT_2576 Exodeoxyribonuclease I subunit D (EC 3.1.11.1) 0.83 EX28DRAFT_0724 GAF domain-containing protein low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_00985 Nuclease SbcCD subunit D 0.83 MPMX20_02739 Free methionine-R-sulfoxide reductase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF4294 Exonuclease SbcD 0.78 GFF2847 Free methionine-(R)-sulfoxide reductase, contains GAF domain low > 78
Klebsiella michiganensis M5al 0.77 BWI76_RS06225 exonuclease sbcCD subunit D 0.73 BWI76_RS17985 hypothetical protein low > 92
Serratia liquefaciens MT49 0.62 IAI46_04770 exonuclease subunit SbcD 0.59 IAI46_10790 GAF domain-containing protein low > 86
Rahnella sp. WP5 0.61 EX31_RS22035 exonuclease subunit SbcD 0.60 EX31_RS24870 GAF domain-containing protein low > 89
Erwinia tracheiphila SCR3 0.60 LU632_RS18930 sbcD exonuclease subunit SbcD 0.61 LU632_RS13260 GAF domain-containing protein low > 74
Pectobacterium carotovorum WPP14 0.59 HER17_RS16045 exonuclease subunit SbcD 0.59 HER17_RS11700 GAF domain-containing protein low > 75
Dickeya dianthicola ME23 0.58 DZA65_RS05805 exonuclease subunit SbcD 0.55 DZA65_RS12515 GAF domain-containing protein low > 75
Dickeya dianthicola 67-19 0.58 HGI48_RS05480 exonuclease subunit SbcD 0.54 HGI48_RS12065 GAF domain-containing protein low > 71
Dickeya dadantii 3937 0.58 DDA3937_RS05420 exonuclease subunit SbcD 0.54 DDA3937_RS11975 GAF domain-containing protein low > 74
Pantoea sp. MT58 0.57 IAI47_14860 exonuclease subunit SbcD 0.62 IAI47_08695 GAF domain-containing protein low > 76
Pontibacter actiniarum KMM 6156, DSM 19842 0.30 CA264_11095 exonuclease sbcCD subunit D 0.31 CA264_17885 GAF domain-containing protein low > 74
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_1715 Exodeoxyribonuclease I subunit D 0.45 Psyr_3610 GAF low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_1715 Exodeoxyribonuclease I subunit D 0.45 Psyr_3610 GAF
Shewanella amazonensis SB2B 0.18 Sama_1267 exonuclease SbcD, putative (RefSeq) 0.50 Sama_1583 GAF domain-containing protein (RefSeq) low > 62

Not shown: 18 genomes with orthologs for ECD_00346 only; 18 genomes with orthologs for ECD_01803 only