Conservation of cofitness between ECD_00977 and ECD_01565 in Escherichia coli BL21

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00977 hydrogenase 1, b-type cytochrome subunit 1.0 ECD_01565 putative arabinose efflux transporter 0.33 20
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02692 putative Ni/Fe-hydrogenase 1 B-type cytochrome subunit 1.00 OHPLBJKB_02130 Inner membrane transport protein YnfM low > 73
Escherichia coli ECRC102 1.00 NIAGMN_23050 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 NIAGMN_00345 ynfM Inner membrane transport protein YnfM
Escherichia coli ECOR38 1.00 HEPCGN_23370 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 HEPCGN_06105 ynfM Inner membrane transport protein YnfM low > 85
Escherichia coli ECRC62 1.00 BNILDI_19870 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 BNILDI_17025 ynfM Inner membrane transport protein YnfM
Escherichia coli ECRC99 1.00 KEDOAH_22945 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 0.99 KEDOAH_00375 araJ MFS transporter
Escherichia coli ECRC101 1.00 MCAODC_24185 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 MCAODC_17680 ynfM Inner membrane transport protein YnfM
Escherichia coli ECRC98 1.00 JDDGAC_08410 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 JDDGAC_02320 ynfM Inner membrane transport protein YnfM
Escherichia coli ECRC101 1.00 OKFHMN_04800 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 OKFHMN_27730 ynfM Inner membrane transport protein YnfM
Escherichia coli BW25113 1.00 b0974 hyaC hydrogenase 1, b-type cytochrome subunit (NCBI) 1.00 b1596 ynfM predicted transporter (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_21705 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 NOLOHH_18235 araJ MFS transporter
Escherichia fergusonii Becca 0.99 EFB2_03097 putative Ni/Fe-hydrogenase 1 B-type cytochrome subunit 1.00 EFB2_02396 Inner membrane transport protein YnfM low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS05120 Ni/Fe-hydrogenase b-type cytochrome subunit 0.99 ECOLIN_RS08915 MFS transporter
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF2789 Ni,Fe-hydrogenase I cytochrome b subunit 0.87 GFF1787 Permeases of the major facilitator superfamily low > 78
Azospirillum sp. SherDot2 0.46 MPMX19_05286 putative Ni/Fe-hydrogenase B-type cytochrome subunit 0.40 MPMX19_01172 Inner membrane transport protein YnfM low > 112
Rhodopseudomonas palustris CGA009 0.45 TX73_004965 Ni/Fe-hydrogenase, b-type cytochrome subunit 0.08 TX73_014915 MFS transporter low > 86
Shewanella loihica PV-4 0.15 Shew_1763 Ni/Fe-hydrogenase, b-type cytochrome subunit (RefSeq) 0.23 Shew_1441 major facilitator transporter (RefSeq) low > 60
Shewanella oneidensis MR-1 0.15 SO2097 hydC quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit (NCBI ptt file) 0.19 SO1917 multidrug resistance protein, putative (NCBI ptt file) 0.26 28
Shewanella sp. ANA-3 0.14 Shewana3_1878 Ni/Fe-hydrogenase, b-type cytochrome subunit (RefSeq) 0.18 Shewana3_1692 Xaa-His dipeptidase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.13 Sama_1677 quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit (RefSeq) 0.16 Sama_2214 multidrug resistance protein, putative (RefSeq) low > 62

Not shown: 3 genomes with orthologs for ECD_00977 only; 45 genomes with orthologs for ECD_01565 only