Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BL21 | 1.0 | ECD_00977 | | hydrogenase 1, b-type cytochrome subunit | 1.0 | ECD_01565 | | putative arabinose efflux transporter | 0.33 | 20 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_02692 | | putative Ni/Fe-hydrogenase 1 B-type cytochrome subunit | 1.00 | OHPLBJKB_02130 | | Inner membrane transport protein YnfM | low | > 73 |
Escherichia coli ECRC102 | 1.00 | NIAGMN_23050 | hyaC | Ni/Fe-hydrogenase b-type cytochrome subunit | 1.00 | NIAGMN_00345 | ynfM | Inner membrane transport protein YnfM | — | — |
Escherichia coli ECOR38 | 1.00 | HEPCGN_23370 | hyaC | Ni/Fe-hydrogenase b-type cytochrome subunit | 1.00 | HEPCGN_06105 | ynfM | Inner membrane transport protein YnfM | low | > 85 |
Escherichia coli ECRC62 | 1.00 | BNILDI_19870 | hyaC | Ni/Fe-hydrogenase b-type cytochrome subunit | 1.00 | BNILDI_17025 | ynfM | Inner membrane transport protein YnfM | — | — |
Escherichia coli ECRC99 | 1.00 | KEDOAH_22945 | hyaC | Ni/Fe-hydrogenase b-type cytochrome subunit | 0.99 | KEDOAH_00375 | araJ | MFS transporter | — | — |
Escherichia coli ECRC101 | 1.00 | MCAODC_24185 | hyaC | Ni/Fe-hydrogenase b-type cytochrome subunit | 1.00 | MCAODC_17680 | ynfM | Inner membrane transport protein YnfM | — | — |
Escherichia coli ECRC98 | 1.00 | JDDGAC_08410 | hyaC | Ni/Fe-hydrogenase b-type cytochrome subunit | 1.00 | JDDGAC_02320 | ynfM | Inner membrane transport protein YnfM | — | — |
Escherichia coli ECRC101 | 1.00 | OKFHMN_04800 | hyaC | Ni/Fe-hydrogenase b-type cytochrome subunit | 1.00 | OKFHMN_27730 | ynfM | Inner membrane transport protein YnfM | — | — |
Escherichia coli BW25113 | 1.00 | b0974 | hyaC | hydrogenase 1, b-type cytochrome subunit (NCBI) | 1.00 | b1596 | ynfM | predicted transporter (NCBI) | low | > 76 |
Escherichia coli ECOR27 | 1.00 | NOLOHH_21705 | hyaC | Ni/Fe-hydrogenase b-type cytochrome subunit | 1.00 | NOLOHH_18235 | araJ | MFS transporter | — | — |
Escherichia fergusonii Becca | 0.99 | EFB2_03097 | | putative Ni/Fe-hydrogenase 1 B-type cytochrome subunit | 1.00 | EFB2_02396 | | Inner membrane transport protein YnfM | low | > 86 |
Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS05120 | | Ni/Fe-hydrogenase b-type cytochrome subunit | 0.99 | ECOLIN_RS08915 | | MFS transporter | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.85 | GFF2789 | | Ni,Fe-hydrogenase I cytochrome b subunit | 0.87 | GFF1787 | | Permeases of the major facilitator superfamily | low | > 78 |
Azospirillum sp. SherDot2 | 0.46 | MPMX19_05286 | | putative Ni/Fe-hydrogenase B-type cytochrome subunit | 0.40 | MPMX19_01172 | | Inner membrane transport protein YnfM | low | > 112 |
Rhodopseudomonas palustris CGA009 | 0.45 | TX73_004965 | | Ni/Fe-hydrogenase, b-type cytochrome subunit | 0.08 | TX73_014915 | | MFS transporter | low | > 86 |
Shewanella loihica PV-4 | 0.15 | Shew_1763 | | Ni/Fe-hydrogenase, b-type cytochrome subunit (RefSeq) | 0.23 | Shew_1441 | | major facilitator transporter (RefSeq) | low | > 60 |
Shewanella oneidensis MR-1 | 0.15 | SO2097 | hydC | quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit (NCBI ptt file) | 0.19 | SO1917 | | multidrug resistance protein, putative (NCBI ptt file) | 0.26 | 28 |
Shewanella sp. ANA-3 | 0.14 | Shewana3_1878 | | Ni/Fe-hydrogenase, b-type cytochrome subunit (RefSeq) | 0.18 | Shewana3_1692 | | Xaa-His dipeptidase (RefSeq) | low | > 73 |
Shewanella amazonensis SB2B | 0.13 | Sama_1677 | | quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit (RefSeq) | 0.16 | Sama_2214 | | multidrug resistance protein, putative (RefSeq) | low | > 62 |
Not shown: 3 genomes with orthologs for ECD_00977 only; 45 genomes with orthologs for ECD_01565 only