Conservation of cofitness between ECD_00807 and ECD_00774 in Escherichia coli BL21

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00807 deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx 1.0 ECD_00774 23S rRNA m(6)A1618 methyltransferase, SAM-dependent 0.44 20
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02870 Deoxyribose operon repressor 1.00 OHPLBJKB_02906 Ribosomal RNA large subunit methyltransferase F low > 73
Escherichia coli ECOR38 1.00 HEPCGN_01995 deoR DNA-binding transcriptional repressor DeoR 0.98 HEPCGN_01810 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF low > 85
Escherichia coli ECRC101 1.00 OKFHMN_06035 deoR DNA-binding transcriptional repressor DeoR 0.99 OKFHMN_06230 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF — —
Escherichia coli ECRC101 1.00 MCAODC_25250 deoR DNA-binding transcriptional repressor DeoR 0.99 MCAODC_25445 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF — —
Escherichia coli ECRC99 1.00 KEDOAH_21875 deoR DNA-binding transcriptional repressor DeoR 0.99 KEDOAH_21680 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF — —
Escherichia fergusonii Becca 1.00 EFB2_03266 Deoxyribose operon repressor 0.99 EFB2_03298 Ribosomal RNA large subunit methyltransferase F low > 86
Escherichia coli BW25113 1.00 b0840 deoR DNA-binding transcriptional repressor (NCBI) 1.00 b0807 ybiN orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_04080 deoR DNA-binding transcriptional repressor DeoR 0.99 NIAGMN_04275 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04465 DNA-binding transcriptional repressor DeoR 0.99 ECOLIN_RS04295 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF — —
Escherichia coli ECRC98 1.00 JDDGAC_09670 deoR DNA-binding transcriptional repressor DeoR 0.99 JDDGAC_09865 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF — —
Escherichia coli ECRC62 1.00 BNILDI_20665 deoR DNA-binding transcriptional repressor DeoR 1.00 BNILDI_20860 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF — —
Escherichia coli ECOR27 1.00 NOLOHH_22405 deoR DNA-binding transcriptional repressor DeoR 0.99 NOLOHH_22580 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF low > 57
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF745 Deoxyribose operon repressor, DeoR family 0.86 GFF702 Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51) low > 78
Enterobacter sp. TBS_079 0.84 MPMX20_01478 Deoxyribose operon repressor 0.76 MPMX20_01436 Ribosomal RNA large subunit methyltransferase F low > 85
Enterobacter asburiae PDN3 0.83 EX28DRAFT_2126 transcriptional regulator, DeoR family 0.77 EX28DRAFT_2183 Predicted SAM-dependent methyltransferase 0.49 76
Klebsiella michiganensis M5al 0.79 BWI76_RS09150 DNA-binding transcriptional repressor DeoR 0.78 BWI76_RS08955 23S rRNA (adenine(1618)-N(6))-methyltransferase low > 92
Serratia liquefaciens MT49 0.57 IAI46_08300 DNA-binding transcriptional repressor DeoR 0.53 IAI46_07510 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF low > 86
Pectobacterium carotovorum WPP14 0.56 HER17_RS12540 DNA-binding transcriptional repressor DeoR 0.64 HER17_RS17915 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF low > 75
Pantoea sp. MT58 0.54 IAI47_16320 DNA-binding transcriptional repressor DeoR 0.51 IAI47_13215 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF low > 76
Rahnella sp. WP5 0.53 EX31_RS24185 DNA-binding transcriptional repressor DeoR 0.51 EX31_RS18995 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_4490 transcriptional regulator, DeoR family 0.53 Psyr_1085 23S rRNA m(6)A-1618 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_4490 transcriptional regulator, DeoR family 0.53 Psyr_1085 23S rRNA m(6)A-1618 methyltransferase low > 86

Not shown: 11 genomes with orthologs for ECD_00807 only; 24 genomes with orthologs for ECD_00774 only