Conservation of cofitness between ECD_02882 and ECD_00601 in Escherichia coli BL21

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02882 general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter 1.0 ECD_00601 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) 0.72 19
Escherichia coli ECRC101 1.00 MCAODC_09470 yghB Inner membrane protein YghB 1.00 MCAODC_26595 dacA D-alanyl-D-alanine carboxypeptidase DacA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00692 Inner membrane protein YghB 1.00 OHPLBJKB_03074 D-alanyl-D-alanine carboxypeptidase DacA 0.44 51
Escherichia coli ECRC98 1.00 JDDGAC_22590 yghB Inner membrane protein YghB 1.00 JDDGAC_11025 dacA D-alanyl-D-alanine carboxypeptidase DacA low > 86
Escherichia coli ECRC99 1.00 KEDOAH_09190 yghB Inner membrane protein YghB 1.00 KEDOAH_20590 dacA D-alanyl-D-alanine carboxypeptidase DacA — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS17320 DedA family general envelope maintenance protein YghB 1.00 ECOLIN_RS03445 D-alanyl-D-alanine carboxypeptidase DacA — —
Escherichia fergusonii Becca 1.00 EFB2_00801 Inner membrane protein YghB 1.00 EFB2_03460 D-alanyl-D-alanine carboxypeptidase DacA low > 86
Escherichia coli ECRC100 1.00 OKFHMN_18955 yghB Inner membrane protein YghB 1.00 OKFHMN_07380 dacA D-alanyl-D-alanine carboxypeptidase DacA low > 80
Escherichia coli ECRC102 1.00 NIAGMN_16720 yghB Inner membrane protein YghB 1.00 NIAGMN_05435 dacA D-alanyl-D-alanine carboxypeptidase DacA — —
Escherichia coli ECRC62 1.00 BNILDI_00785 yghB Inner membrane protein YghB 1.00 BNILDI_21765 dacA D-alanyl-D-alanine carboxypeptidase DacA low > 75
Escherichia coli ECOR27 1.00 NOLOHH_10730 yghB Inner membrane protein YghB 1.00 NOLOHH_23755 dacA D-alanyl-D-alanine carboxypeptidase DacA low > 75
Escherichia coli BW25113 1.00 b3009 yghB conserved inner membrane protein (NCBI) 1.00 b0632 dacA D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_17820 yghB Inner membrane protein YghB 1.00 HEPCGN_00895 dacA D-alanyl-D-alanine carboxypeptidase DacA 0.77 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF3121 DedA family inner membrane protein YghB 0.97 GFF4545 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 78
Klebsiella michiganensis M5al 0.86 BWI76_RS24290 membrane protein 0.91 BWI76_RS08020 serine-type D-Ala-D-Ala carboxypeptidase low > 92
Enterobacter sp. TBS_079 0.86 MPMX20_03853 Inner membrane protein YghB 0.96 MPMX20_01291 D-alanyl-D-alanine carboxypeptidase DacA low > 85
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3047 Uncharacterized membrane-associated protein 0.92 EX28DRAFT_2331 D-alanyl-D-alanine carboxypeptidase 0.31 65
Pantoea sp. MT58 0.74 IAI47_03210 DedA family protein 0.84 IAI47_14040 D-alanyl-D-alanine carboxypeptidase DacA low > 76
Rahnella sp. WP5 0.72 EX31_RS08030 DedA family protein 0.83 EX31_RS23105 D-alanyl-D-alanine carboxypeptidase DacA low > 89
Erwinia tracheiphila SCR3 0.70 LU632_RS20550 DedA family protein 0.83 LU632_RS16390 dacA D-alanyl-D-alanine carboxypeptidase DacA low > 74
Dickeya dadantii 3937 0.69 DDA3937_RS01810 DedA family protein 0.80 DDA3937_RS06155 D-alanyl-D-alanine carboxypeptidase DacA low > 74
Dickeya dianthicola 67-19 0.69 HGI48_RS01705 DedA family protein 0.79 HGI48_RS06200 D-alanyl-D-alanine carboxypeptidase DacA low > 71
Dickeya dianthicola ME23 0.69 DZA65_RS01780 DedA family protein 0.79 DZA65_RS06545 D-alanyl-D-alanine carboxypeptidase DacA low > 75
Pectobacterium carotovorum WPP14 0.68 HER17_RS19695 DedA family protein 0.82 HER17_RS15260 D-alanyl-D-alanine carboxypeptidase DacA low > 75
Serratia liquefaciens MT49 0.65 IAI46_21730 DedA family protein 0.85 IAI46_05915 D-alanyl-D-alanine carboxypeptidase DacA low > 86
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_16905 DedA family protein 0.53 CSW01_04845 D-alanyl-D-alanine carboxypeptidase low > 62

Not shown: 0 genomes with orthologs for ECD_02882 only; 5 genomes with orthologs for ECD_00601 only