Conservation of cofitness between ECD_00291 and ECD_00184 in Escherichia coli BL21

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00291 cytosine/isoguanine deaminase 1.0 ECD_00184 lysine decarboxylase 2, constitutive 0.68 6
Escherichia coli BW25113 1.00 b0337 codA cytosine deaminase (NCBI) 1.00 b0186 ldcC lysine decarboxylase 2, constitutive (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03334 Cytosine deaminase 1.00 OHPLBJKB_03477 Constitutive lysine decarboxylase low > 73
Escherichia coli ECRC62 0.99 BNILDI_23160 codA cytosine/isoguanine deaminase 1.00 BNILDI_09200 ldcC lysine decarboxylase LdcC low > 75
Escherichia coli ECOR27 0.99 NOLOHH_01745 codA cytosine/isoguanine deaminase 1.00 NOLOHH_02470 ldcC lysine decarboxylase LdcC low > 75
Escherichia coli ECOR38 0.99 HEPCGN_07460 codA cytosine/isoguanine deaminase 0.99 HEPCGN_08080 ldcC lysine decarboxylase LdcC 0.64 50
Escherichia coli ECRC99 0.99 KEDOAH_19120 codA cytosine/isoguanine deaminase 1.00 KEDOAH_18030 ldcC lysine decarboxylase LdcC — —
Escherichia coli ECRC100 0.99 OKFHMN_08845 codA cytosine/isoguanine deaminase 1.00 OKFHMN_10125 ldcC lysine decarboxylase LdcC low > 80
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02175 cytosine/isoguanine deaminase 0.99 ECOLIN_RS01010 lysine decarboxylase LdcC low > 55
Escherichia coli ECRC102 0.99 NIAGMN_06900 codA cytosine/isoguanine deaminase 1.00 NIAGMN_07975 ldcC lysine decarboxylase LdcC — —
Escherichia coli ECRC101 0.99 MCAODC_28075 codA cytosine/isoguanine deaminase 1.00 MCAODC_00640 ldcC lysine decarboxylase LdcC low > 87
Escherichia coli ECRC98 0.99 JDDGAC_12500 codA cytosine/isoguanine deaminase 1.00 JDDGAC_13720 ldcC lysine decarboxylase LdcC low > 86
Escherichia fergusonii Becca 0.99 EFB2_03701 Cytosine deaminase 0.99 EFB2_03858 Constitutive lysine decarboxylase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2960 Cytosine deaminase (EC 3.5.4.1) 0.92 GFF35 Lysine decarboxylase 2, constitutive (EC 4.1.1.18) low > 78
Serratia liquefaciens MT49 0.83 IAI46_23650 cytosine deaminase 0.82 IAI46_20175 lysine decarboxylase LdcC low > 86
Rahnella sp. WP5 0.81 EX31_RS04665 cytosine deaminase 0.81 EX31_RS12950 lysine decarboxylase LdcC low > 89
Pantoea sp. MT58 0.80 IAI47_01925 cytosine deaminase 0.84 IAI47_15445 lysine decarboxylase LdcC low > 76
Enterobacter asburiae PDN3 0.77 EX28DRAFT_4163 Cytosine deaminase and related metal-dependent hydrolases 0.90 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases low > 76
Klebsiella michiganensis M5al 0.77 BWI76_RS26030 cytosine deaminase 0.89 BWI76_RS05300 lysine decarboxylase LdcC low > 92
Enterobacter sp. TBS_079 0.77 MPMX20_04268 Cytosine deaminase 0.90 MPMX20_00870 Constitutive lysine decarboxylase low > 85
Sinorhizobium meliloti 1021 0.41 SMa2371 cytosine deaminase 0.36 SMa0682 decarboxylase (lysine, ornithine, arginine) low > 103

Not shown: 36 genomes with orthologs for ECD_00291 only; 2 genomes with orthologs for ECD_00184 only