Conservation of cofitness between ECD_00218 and ECD_00184 in Escherichia coli BL21

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00218 type 2 glutamine amidotransferase family protein 1.0 ECD_00184 lysine decarboxylase 2, constitutive 0.47 11
Escherichia coli ECOR38 0.99 HEPCGN_07875 yafJ Putative glutamine amidotransferase YafJ 0.99 HEPCGN_08080 ldcC lysine decarboxylase LdcC low > 87
Escherichia coli ECOR27 0.99 NOLOHH_02140 yafJ Putative glutamine amidotransferase YafJ 1.00 NOLOHH_02470 ldcC lysine decarboxylase LdcC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03416 Putative glutamine amidotransferase YafJ 1.00 OHPLBJKB_03477 Constitutive lysine decarboxylase low > 73
Escherichia coli BW25113 0.99 b0223 yafJ predicted amidotransfease (NCBI) 1.00 b0186 ldcC lysine decarboxylase 2, constitutive (NCBI) low > 76
Escherichia coli ECRC62 0.99 BNILDI_00335 yafJ Putative glutamine amidotransferase YafJ 1.00 BNILDI_09200 ldcC lysine decarboxylase LdcC low > 75
Escherichia fergusonii Becca 0.99 EFB2_03794 Putative glutamine amidotransferase YafJ 0.99 EFB2_03858 Constitutive lysine decarboxylase 0.30 56
Escherichia coli Nissle 1917 0.99 ECOLIN_RS01755 class II glutamine amidotransferase 0.99 ECOLIN_RS01010 lysine decarboxylase LdcC low > 55
Escherichia coli ECRC99 0.99 KEDOAH_18385 yafJ class II glutamine amidotransferase 1.00 KEDOAH_18030 ldcC lysine decarboxylase LdcC — —
Escherichia coli ECRC101 0.99 MCAODC_00290 yafJ class II glutamine amidotransferase 1.00 MCAODC_00640 ldcC lysine decarboxylase LdcC low > 87
Escherichia coli ECRC102 0.99 NIAGMN_07630 yafJ class II glutamine amidotransferase 1.00 NIAGMN_07975 ldcC lysine decarboxylase LdcC — —
Escherichia coli ECRC100 0.99 OKFHMN_09770 yafJ class II glutamine amidotransferase 1.00 OKFHMN_10125 ldcC lysine decarboxylase LdcC low > 80
Escherichia coli ECRC98 0.99 JDDGAC_13395 yafJ class II glutamine amidotransferase 1.00 JDDGAC_13720 ldcC lysine decarboxylase LdcC low > 86
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2666 Predicted glutamine amidotransferase 0.90 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4102 Predicted glutamine amidotransferase 0.92 GFF35 Lysine decarboxylase 2, constitutive (EC 4.1.1.18) low > 78
Enterobacter sp. TBS_079 0.94 MPMX20_00912 Putative glutamine amidotransferase YafJ 0.90 MPMX20_00870 Constitutive lysine decarboxylase low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS05480 class II glutamine amidotransferase 0.89 BWI76_RS05300 lysine decarboxylase LdcC low > 92
Serratia liquefaciens MT49 0.86 IAI46_04345 class II glutamine amidotransferase 0.82 IAI46_20175 lysine decarboxylase LdcC low > 86
Rahnella sp. WP5 0.86 EX31_RS21015 class II glutamine amidotransferase 0.81 EX31_RS12950 lysine decarboxylase LdcC low > 89
Pantoea sp. MT58 0.85 IAI47_15185 class II glutamine amidotransferase 0.84 IAI47_15445 lysine decarboxylase LdcC low > 76
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS24040 glutamine amidotransferase 0.34 HSERO_RS17280 lysine decarboxylase — —

Not shown: 46 genomes with orthologs for ECD_00218 only; 2 genomes with orthologs for ECD_00184 only