Conservation of cofitness between DZA65_RS01875 and DZA65_RS11855 in Dickeya dianthicola ME23

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS01875 anaerobic ribonucleoside-triphosphate reductase-activating protein 1.0 DZA65_RS11855 23S rRNA pseudouridine(2457) synthase RluE 0.29 18
Dickeya dianthicola 67-19 1.00 HGI48_RS01820 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.99 HGI48_RS11520 23S rRNA pseudouridine(2457) synthase RluE low > 71
Dickeya dadantii 3937 0.93 DDA3937_RS01870 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.96 DDA3937_RS11475 23S rRNA pseudouridine(2457) synthase RluE low > 74
Pectobacterium carotovorum WPP14 0.80 HER17_RS19530 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.74 HER17_RS11615 23S rRNA pseudouridine(2457) synthase RluE low > 75
Enterobacter sp. TBS_079 0.79 MPMX20_00530 Anaerobic ribonucleoside-triphosphate reductase-activating protein 0.70 MPMX20_01819 Ribosomal large subunit pseudouridine synthase E low > 85
Enterobacter asburiae PDN3 0.79 EX28DRAFT_3436 anaerobic ribonucleoside-triphosphate reductase activating protein 0.69 EX28DRAFT_1795 pseudouridine synthase low > 76
Klebsiella michiganensis M5al 0.79 BWI76_RS02930 anaerobic ribonucleoside-triphosphate reductase activating protein 0.69 BWI76_RS11325 23S rRNA pseudouridine synthase E — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF918 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) 0.71 GFF3421 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_03798 Anaerobic ribonucleoside-triphosphate reductase-activating protein 0.70 OHPLBJKB_02533 Ribosomal large subunit pseudouridine synthase E low > 73
Serratia liquefaciens MT49 0.78 IAI46_02130 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.70 IAI46_10455 23S rRNA pseudouridine(2457) synthase RluE low > 86
Escherichia coli ECRC62 0.78 BNILDI_07335 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.71 BNILDI_19055 rluE 23S rRNA pseudouridine(2457) synthase RluE low > 75
Escherichia fergusonii Becca 0.78 EFB2_04296 Anaerobic ribonucleoside-triphosphate reductase-activating protein 0.71 EFB2_02840 Ribosomal large subunit pseudouridine synthase E low > 86
Escherichia coli ECOR38 0.77 HEPCGN_10110 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.66 HEPCGN_24230 rluE 23S rRNA pseudouridine(2457) synthase RluE low > 87
Escherichia coli BW25113 0.77 b4237 nrdG anaerobic ribonucleotide reductase activating protein (NCBI) 0.71 b1135 ymfC orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC102 0.77 NIAGMN_09765 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.71 NIAGMN_24900 rluE 23S rRNA pseudouridine(2457) synthase RluE — —
Escherichia coli ECRC99 0.77 KEDOAH_16240 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.71 KEDOAH_24840 rluE 23S rRNA pseudouridine(2457) synthase RluE — —
Escherichia coli ECRC100 0.77 OKFHMN_11915 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.71 OKFHMN_00755 rluE 23S rRNA pseudouridine(2457) synthase RluE low > 80
Escherichia coli ECOR27 0.77 NOLOHH_04175 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.71 NOLOHH_20890 rluE 23S rRNA pseudouridine(2457) synthase RluE low > 75
Escherichia coli ECRC98 0.77 JDDGAC_15555 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.71 JDDGAC_06610 rluE 23S rRNA pseudouridine(2457) synthase RluE low > 86
Escherichia coli ECRC101 0.77 MCAODC_02420 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.71 MCAODC_22330 rluE 23S rRNA pseudouridine(2457) synthase RluE low > 87
Escherichia coli BL21 0.77 ECD_04105 anaerobic ribonucleotide reductase activating protein 0.70 ECD_01133 23S rRNA pseudouridine(2457) synthase low > 61
Rahnella sp. WP5 0.76 EX31_RS08400 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.72 EX31_RS24585 23S rRNA pseudouridine(2457) synthase RluE low > 89
Erwinia tracheiphila SCR3 0.75 LU632_RS20980 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.63 LU632_RS14565 rluE 23S rRNA pseudouridine(2457) synthase RluE low > 74
Pantoea sp. MT58 0.74 IAI47_16930 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.65 IAI47_11905 23S rRNA pseudouridine(2457) synthase RluE low > 76
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_16805 anaerobic ribonucleoside-triphosphate reductase activating protein 0.59 CSW01_05785 23S rRNA pseudouridine synthase E low > 62
Shewanella amazonensis SB2B 0.58 Sama_1276 nrdG anaerobic ribonucleotide reductase-activating protein (RefSeq) 0.56 Sama_2060 pseudouridylate synthase (RefSeq) low > 62

Not shown: 9 genomes with orthologs for DZA65_RS01875 only; 38 genomes with orthologs for DZA65_RS11855 only