Conservation of cofitness between CSW01_19400 and CSW01_18780 in Vibrio cholerae E7946 ATCC 55056

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_19400 putrescine-ornithine antiporter 1.0 CSW01_18780 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.58 13
Shewanella amazonensis SB2B 0.90 Sama_3335 potE putrescine transporter (RefSeq) 0.59 Sama_0630 rumB 23S rRNA methyluridine methyltransferase (RefSeq) low > 62
Shewanella sp. ANA-3 0.86 Shewana3_3872 potE putrescine transporter (RefSeq) 0.59 Shewana3_3309 rumB 23S rRNA methyluridine methyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.86 SO0313 potE putrescine-ornithine antiporter (NCBI ptt file) 0.60 SO0980 RNA methyltransferase, TrmA family (NCBI ptt file) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF4603 Putrescine/proton symporter, putrescine/ornithine antiporter PotE 0.51 GFF763 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) low > 78
Escherichia coli ECRC62 0.76 BNILDI_21480 potE putrescine-ornithine antiporter 0.54 BNILDI_20560 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 75
Escherichia coli ECOR38 0.76 HEPCGN_01140 potE putrescine-ornithine antiporter 0.55 HEPCGN_02095 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 88
Escherichia fergusonii Becca 0.76 EFB2_03405 Putrescine transporter PotE 0.55 EFB2_03202 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 86
Escherichia coli Nissle 1917 0.76 ECOLIN_RS03735 putrescine-ornithine antiporter 0.55 ECOLIN_RS04575 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 55
Escherichia coli BL21 0.76 ECD_00648 putrescine/proton symporter: putrescine/ornithine antiporter 0.54 ECD_00864 23S rRNA m(5)U747 methyltransferase, SAM-dependent 0.42 39
Escherichia coli ECOR27 0.76 NOLOHH_23475 potE putrescine-ornithine antiporter 0.55 NOLOHH_22305 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 76
Escherichia coli BW25113 0.76 b0692 potE putrescine/proton symporter: putrescine/ornithine antiporter (NCBI) 0.54 b0859 rumB 23S rRNA m(5)U747-methyltransferase (NCBI) low > 76
Serratia liquefaciens MT49 0.76 IAI46_02035 putrescine-ornithine antiporter 0.54 IAI46_08395 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 87
Escherichia coli ECRC100 0.76 OKFHMN_07095 potE putrescine-ornithine antiporter 0.55 OKFHMN_05935 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 79
Escherichia coli ECRC102 0.76 NIAGMN_05150 potE putrescine-ornithine antiporter 0.55 NIAGMN_03980 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 80
Escherichia coli ECRC99 0.76 KEDOAH_20875 potE putrescine-ornithine antiporter 0.55 KEDOAH_21975 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC — —
Escherichia coli ECRC98 0.76 JDDGAC_10745 potE putrescine-ornithine antiporter 0.54 JDDGAC_09570 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 87
Escherichia coli ECRC101 0.76 MCAODC_26310 potE putrescine-ornithine antiporter 0.55 MCAODC_25150 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 87
Enterobacter asburiae PDN3 0.75 EX28DRAFT_2286 putrescine-ornithine antiporter 0.53 EX28DRAFT_2094 23S rRNA (uracil-5-)-methyltransferase RumB low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_01335 Putrescine transporter PotE 0.53 MPMX20_01500 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 85

Not shown: 19 genomes with orthologs for CSW01_19400 only; 15 genomes with orthologs for CSW01_18780 only