Conservation of cofitness between CSW01_12875 and CSW01_16950 in Vibrio cholerae E7946 ATCC 55056

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12875 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 1.0 CSW01_16950 ATP-dependent endonuclease 0.66 3
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03802 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.37 OHPLBJKB_02792 hypothetical protein low > 74
Escherichia coli ECRC99 0.71 KEDOAH_16215 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.37 KEDOAH_22090 ybjD Uncharacterized protein YbjD — —
Escherichia fergusonii Becca 0.71 EFB2_04300 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.37 EFB2_03185 hypothetical protein low > 86
Escherichia coli ECOR27 0.71 NOLOHH_04200 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.37 NOLOHH_22215 ybjD Uncharacterized protein YbjD low > 76
Escherichia coli ECOR38 0.71 HEPCGN_10140 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.37 HEPCGN_22865 ybjD Uncharacterized protein YbjD low > 88
Escherichia coli BL21 0.71 ECD_04101 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.37 ECD_00881 putative OLD family ATP-dependent endonuclease; DUF2813 family protein low > 61
Escherichia coli ECRC100 0.71 OKFHMN_11940 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.37 OKFHMN_05820 ybjD Uncharacterized protein YbjD low > 79
Escherichia coli ECRC98 0.71 JDDGAC_15580 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.37 JDDGAC_09455 ybjD Uncharacterized protein YbjD low > 87
Escherichia coli ECRC101 0.71 MCAODC_02445 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.37 MCAODC_25035 ybjD Uncharacterized protein YbjD low > 88
Escherichia coli ECRC62 0.71 BNILDI_07315 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.37 BNILDI_20470 ybjD Uncharacterized protein YbjD low > 75
Escherichia coli BW25113 0.71 b4233 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (NCBI) 0.37 b0876 ybjD conserved protein with nucleoside triphosphate hydrolase domain (NCBI) low > 76
Klebsiella pneumoniae MKP103 0.71 KDGMDA_11310 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.37 KDGMDA_17835 ATP-dependent endonuclease low > 95
Escherichia coli ECRC102 0.71 NIAGMN_09790 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.37 NIAGMN_03860 ybjD Uncharacterized protein YbjD low > 80
Escherichia coli Nissle 1917 0.71 ECOLIN_RS24560 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.37 ECOLIN_RS04665 ATP-dependent endonuclease — —
Serratia liquefaciens MT49 0.70 IAI46_01800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.39 IAI46_08485 ATP-dependent endonuclease low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF881 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.36 GFF4907 Predicted ATP-dependent endonuclease of the OLD family, YbjD subgroup low > 78
Enterobacter sp. TBS_079 0.70 MPMX20_00515 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.38 MPMX20_01538 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.70 BWI76_RS02820 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.38 BWI76_RS09590 ATP-dependent OLD family endonuclease low > 92
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS11350 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.35 PagCFBP13505_RS04370 ATP-dependent endonuclease low > 74
Enterobacter asburiae PDN3 0.69 EX28DRAFT_3420 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.37 EX28DRAFT_2056 Predicted ATP-dependent endonuclease of the OLD family low > 76
Dickeya dadantii 3937 0.69 DDA3937_RS18580 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.38 DDA3937_RS09545 ATP-dependent endonuclease low > 74
Pectobacterium carotovorum WPP14 0.69 HER17_RS02615 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.37 HER17_RS12415 ATP-dependent endonuclease low > 75
Pantoea sp. MT58 0.69 IAI47_02755 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.37 IAI47_12960 ATP-dependent endonuclease low > 76
Erwinia amylovora T8 0.69 OLJFJH_02365 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.34 OLJFJH_16235 ATP-dependent endonuclease low > 58
Dickeya dianthicola 67-19 0.68 HGI48_RS18515 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.38 HGI48_RS09560 ATP-dependent endonuclease low > 71
Dickeya dianthicola ME23 0.68 DZA65_RS19650 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.38 DZA65_RS09870 ATP-dependent endonuclease low > 75
Rahnella sp. WP5 0.67 EX31_RS08665 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.37 EX31_RS18580 ATP-dependent endonuclease low > 89

Not shown: 60 genomes with orthologs for CSW01_12875 only; 0 genomes with orthologs for CSW01_16950 only