Conservation of cofitness between CSW01_00850 and CSW01_13440 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00850 multidrug resistance protein 1.0 CSW01_13440 fumarate reductase subunit D 0.64 11
Enterobacter asburiae PDN3 0.24 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.51 EX28DRAFT_3352 succinate dehydrogenase subunit D (EC 1.3.5.1) low > 76
Klebsiella michiganensis M5al 0.24 BWI76_RS06775 multidrug efflux RND transporter permease subunit 0.49 BWI76_RS02440 fumarate reductase subunit D low > 92
Escherichia coli BW25113 0.24 b2470 acrD aminoglycoside/multidrug efflux system (NCBI) 0.50 b4151 frdD fumarate reductase subunit D (NCBI) low > 76
Escherichia coli BL21 0.24 ECD_02361 aminoglycoside/multidrug efflux system 0.50 ECD_04023 fumarate reductase (anaerobic), membrane anchor subunit low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01261 Multidrug efflux pump subunit AcrB 0.50 OHPLBJKB_03889 Fumarate reductase subunit D low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF4246 RND efflux system, inner membrane transporter CmeB 0.49 GFF1999 Fumarate reductase subunit D low > 78
Escherichia fergusonii Becca 0.24 EFB2_01418 Multidrug efflux pump subunit AcrB 0.50 EFB2_04382 Fumarate reductase subunit D low > 86
Escherichia coli ECRC62 0.24 BNILDI_12460 acrD multidrug efflux RND transporter permease AcrD 0.50 BNILDI_06870 frdD fumarate reductase subunit FrdD low > 75
Escherichia coli ECOR38 0.24 HEPCGN_21140 acrD multidrug efflux RND transporter permease AcrD 0.50 HEPCGN_10585 frdD fumarate reductase subunit FrdD low > 88
Escherichia coli ECRC102 0.24 NIAGMN_19740 acrD multidrug efflux RND transporter permease AcrD 0.50 NIAGMN_10205 frdD fumarate reductase subunit FrdD low > 80
Escherichia coli ECRC99 0.24 KEDOAH_06250 acrD multidrug efflux RND transporter permease AcrD 0.50 KEDOAH_15805 frdD fumarate reductase subunit FrdD — —
Escherichia coli ECOR27 0.24 NOLOHH_13650 acrD multidrug efflux RND transporter permease AcrD 0.50 NOLOHH_04620 frdD fumarate reductase subunit FrdD low > 76
Escherichia coli ECRC101 0.24 MCAODC_12500 acrD multidrug efflux RND transporter permease AcrD 0.50 MCAODC_02870 frdD fumarate reductase subunit FrdD low > 88
Escherichia coli ECRC100 0.24 OKFHMN_21970 acrD multidrug efflux RND transporter permease AcrD 0.50 OKFHMN_12360 frdD fumarate reductase subunit FrdD low > 79
Escherichia coli Nissle 1917 0.24 ECOLIN_RS14090 multidrug efflux RND transporter permease AcrD 0.50 ECOLIN_RS24135 fumarate reductase subunit FrdD — —
Escherichia coli ECRC98 0.24 JDDGAC_25915 acrD multidrug efflux RND transporter permease AcrD 0.50 JDDGAC_15995 frdD fumarate reductase subunit FrdD low > 87
Enterobacter sp. TBS_079 0.24 MPMX20_01064 Multidrug efflux pump subunit AcrB 0.50 MPMX20_00434 Fumarate reductase subunit D low > 85
Klebsiella pneumoniae MKP103 0.24 KDGMDA_14835 acriflavine resistance protein B 0.50 KDGMDA_10935 fumarate reductase subunit FrdD low > 95
Serratia liquefaciens MT49 0.23 IAI46_18690 multidrug efflux RND transporter permease AcrD 0.48 IAI46_01535 fumarate reductase subunit FrdD low > 86
Rahnella sp. WP5 0.23 EX31_RS22470 multidrug efflux RND transporter permease subunit 0.47 EX31_RS08915 fumarate reductase subunit FrdD low > 89
Pectobacterium carotovorum WPP14 0.23 HER17_RS01560 multidrug efflux RND transporter permease AcrD 0.45 HER17_RS02375 fumarate reductase subunit FrdD low > 75
Dickeya dadantii 3937 0.23 DDA3937_RS05735 multidrug efflux RND transporter permease subunit 0.41 DDA3937_RS18980 fumarate reductase subunit FrdD low > 74
Dickeya dianthicola 67-19 0.22 HGI48_RS05790 multidrug efflux RND transporter permease subunit 0.40 HGI48_RS19075 fumarate reductase subunit FrdD low > 71
Dickeya dianthicola ME23 0.22 DZA65_RS06115 multidrug efflux RND transporter permease subunit 0.40 DZA65_RS20195 fumarate reductase subunit FrdD low > 75
Erwinia tracheiphila SCR3 0.22 LU632_RS18185 efflux RND transporter permease subunit 0.40 LU632_RS01905 frdD fumarate reductase subunit FrdD — —
Erwinia tracheiphila HP pepo 2.2 0.21 IJEDHG_16580 adeB hydrophobe/amphiphile efflux-1 family RND transporter 0.39 IJEDHG_07010 frdD fumarate reductase subunit FrdD — —

Not shown: 65 genomes with orthologs for CSW01_00850 only; 0 genomes with orthologs for CSW01_13440 only