Conservation of cofitness between CSW01_16950 and CSW01_13155 in Vibrio cholerae E7946 ATCC 55056

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_16950 ATP-dependent endonuclease 1.0 CSW01_13155 ribonuclease R 0.58 4
Serratia liquefaciens MT49 0.39 IAI46_08485 ATP-dependent endonuclease 0.60 IAI46_01660 ribonuclease R 0.90 48
Enterobacter sp. TBS_079 0.38 MPMX20_01538 hypothetical protein 0.60 MPMX20_00460 Ribonuclease R low > 85
Dickeya dianthicola 67-19 0.38 HGI48_RS09560 ATP-dependent endonuclease 0.61 HGI48_RS17315 ribonuclease R low > 71
Klebsiella michiganensis M5al 0.38 BWI76_RS09590 ATP-dependent OLD family endonuclease 0.61 BWI76_RS02575 exoribonuclease R low > 92
Dickeya dianthicola ME23 0.38 DZA65_RS09870 ATP-dependent endonuclease 0.61 DZA65_RS18405 ribonuclease R low > 75
Dickeya dadantii 3937 0.38 DDA3937_RS09545 ATP-dependent endonuclease 0.61 DDA3937_RS17260 ribonuclease R low > 74
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2056 Predicted ATP-dependent endonuclease of the OLD family 0.60 EX28DRAFT_3376 ribonuclease R 0.65 13
Pectobacterium carotovorum WPP14 0.37 HER17_RS12415 ATP-dependent endonuclease 0.62 HER17_RS03835 ribonuclease R low > 75
Klebsiella pneumoniae MKP103 0.37 KDGMDA_17835 ATP-dependent endonuclease 0.61 KDGMDA_11075 ribonuclease R low > 95
Rahnella sp. WP5 0.37 EX31_RS18580 ATP-dependent endonuclease 0.61 EX31_RS08785 ribonuclease R low > 89
Escherichia coli ECOR27 0.37 NOLOHH_22215 ybjD Uncharacterized protein YbjD 0.61 NOLOHH_04485 rnr ribonuclease R low > 76
Escherichia fergusonii Becca 0.37 EFB2_03185 hypothetical protein 0.61 EFB2_04356 Ribonuclease R low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_02792 hypothetical protein 0.61 OHPLBJKB_03863 Ribonuclease R 0.43 10
Escherichia coli Nissle 1917 0.37 ECOLIN_RS04665 ATP-dependent endonuclease 0.61 ECOLIN_RS24265 ribonuclease R — —
Escherichia coli BL21 0.37 ECD_00881 putative OLD family ATP-dependent endonuclease; DUF2813 family protein 0.61 ECD_04046 exoribonuclease R, RNase R low > 61
Escherichia coli ECOR38 0.37 HEPCGN_22865 ybjD Uncharacterized protein YbjD 0.61 HEPCGN_10450 rnr ribonuclease R low > 88
Escherichia coli BW25113 0.37 b0876 ybjD conserved protein with nucleoside triphosphate hydrolase domain (NCBI) 0.61 b4179 vacB putative enzyme (VIMSS) low > 76
Escherichia coli ECRC62 0.37 BNILDI_20470 ybjD Uncharacterized protein YbjD 0.61 BNILDI_07005 rnr ribonuclease R low > 75
Escherichia coli ECRC98 0.37 JDDGAC_09455 ybjD Uncharacterized protein YbjD 0.62 JDDGAC_15860 rnr ribonuclease R low > 87
Escherichia coli ECRC100 0.37 OKFHMN_05820 ybjD Uncharacterized protein YbjD 0.62 OKFHMN_12220 rnr ribonuclease R low > 79
Escherichia coli ECRC102 0.37 NIAGMN_03860 ybjD Uncharacterized protein YbjD 0.62 NIAGMN_10070 rnr ribonuclease R low > 80
Escherichia coli ECRC99 0.37 KEDOAH_22090 ybjD Uncharacterized protein YbjD 0.62 KEDOAH_15935 rnr ribonuclease R — —
Escherichia coli ECRC101 0.37 MCAODC_25035 ybjD Uncharacterized protein YbjD 0.62 MCAODC_02735 rnr ribonuclease R low > 87
Pantoea sp. MT58 0.37 IAI47_12960 ATP-dependent endonuclease 0.60 IAI47_02625 ribonuclease R low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF4907 Predicted ATP-dependent endonuclease of the OLD family, YbjD subgroup 0.61 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 low > 78
Pantoea agglomerans CFBP13505 P0401 0.35 PagCFBP13505_RS04370 ATP-dependent endonuclease 0.60 PagCFBP13505_RS11220 ribonuclease R 0.56 54
Erwinia amylovora T8 0.34 OLJFJH_16235 ATP-dependent endonuclease 0.62 OLJFJH_02470 ribonuclease R low > 58

Not shown: 0 genomes with orthologs for CSW01_16950 only; 84 genomes with orthologs for CSW01_13155 only