Conservation of cofitness between CSW01_12410 and CSW01_07725 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12410 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.0 CSW01_07725 fructosamine kinase family protein 0.51 20
Serratia liquefaciens MT49 0.48 IAI46_03595 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.48 IAI46_10865 fructosamine kinase family protein low > 87
Erwinia amylovora T8 0.48 OLJFJH_09240 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 OLJFJH_14730 Fructosamine kinase low > 58
Pectobacterium carotovorum WPP14 0.48 HER17_RS04110 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.47 HER17_RS11385 fructosamine kinase family protein low > 75
Pantoea sp. MT58 0.47 IAI47_04115 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.45 IAI47_11000 fructosamine kinase family protein low > 76
Pantoea agglomerans CFBP13505 P0401 0.47 PagCFBP13516_RS04385 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.45 PagCFBP13516_RS11170 fructosamine kinase family protein low > 80
Klebsiella pneumoniae MKP103 0.46 KDGMDA_03340 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.45 KDGMDA_24415 Fructosamine kinase low > 94
Klebsiella pneumoniae MRSN742743 0.46 GJGHJB_00975 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.45 GJGHJB_01992 fN3K putative ketoamine kinase EAE_16955 low > 83
Klebsiella michiganensis M5al 0.46 BWI76_RS22810 23S rRNA (uracil(1939)-C(5))-methyltransferase 0.45 BWI76_RS17185 fructosamine kinase family protein low > 92
Rahnella sp. WP5 0.46 EX31_RS07960 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.45 EX31_RS14090 fructosamine kinase family protein low > 89
Escherichia coli ECRC100 0.46 OKFHMN_20245 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 OKFHMN_27025 yniA putative ketoamine kinase YniA low > 79
Escherichia coli ECOR27 0.46 NOLOHH_12120 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 NOLOHH_17545 yniA putative ketoamine kinase YniA low > 75
Escherichia coli ECRC98 0.46 JDDGAC_23910 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 JDDGAC_01600 yniA putative ketoamine kinase YniA — —
Escherichia coli ECRC99 0.46 KEDOAH_07885 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 KEDOAH_01085 yniA putative ketoamine kinase YniA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00946 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 OHPLBJKB_02008 hypothetical protein low > 74
Escherichia coli ECRC101 0.46 MCAODC_10770 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 MCAODC_18385 yniA putative ketoamine kinase YniA low > 87
Escherichia coli ECRC102 0.46 NIAGMN_18015 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 NIAGMN_01040 yniA putative ketoamine kinase YniA low > 80
Escherichia coli BW25113 0.46 b2785 rumA 23S rRNA (uracil-5-)-methyltransferase (NCBI) 0.44 b1725 yniA predicted phosphotransferase/kinase (NCBI) low > 76
Escherichia coli ECOR38 0.46 HEPCGN_19495 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 HEPCGN_05390 yniA putative ketoamine kinase YniA low > 88
Escherichia coli Nissle 1917 0.45 ECOLIN_RS15520 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 ECOLIN_RS09630 fructosamine kinase family protein — —
Escherichia coli ECRC62 0.45 BNILDI_10625 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 BNILDI_16330 yniA putative ketoamine kinase YniA low > 75
Escherichia coli BL21 0.45 ECD_02630 23S rRNA m(5)U1939 methyltransferase, SAM-dependent 0.44 ECD_01694 fructosamine kinase family protein low > 61
Escherichia fergusonii Becca 0.45 EFB2_01132 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 EFB2_02267 putative ketoamine kinase low > 86
Enterobacter sp. TBS_079 0.45 MPMX20_03654 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.45 MPMX20_01889 putative ketoamine kinase low > 85
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2865 23S rRNA (uracil-5-)-methyltransferase RumA 0.44 EX28DRAFT_1730 Fructosamine-3-kinase low > 76
Dickeya dadantii 3937 0.44 DDA3937_RS17020 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 DDA3937_RS11315 fructosamine kinase family protein low > 74
Dickeya dianthicola ME23 0.44 DZA65_RS18150 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.43 DZA65_RS11700 fructosamine kinase family protein low > 75
Dickeya dianthicola 67-19 0.43 HGI48_RS17075 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 HGI48_RS11355 fructosamine kinase family protein low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF4838 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 0.45 GFF3514 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation low > 78
Alteromonas macleodii MIT1002 0.32 MIT1002_00793 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.35 MIT1002_01602 Fructosamine-3-kinase low > 70

Not shown: 56 genomes with orthologs for CSW01_12410 only; 4 genomes with orthologs for CSW01_07725 only