| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_08180 | | Na+/H+ antiporter NhaA | 1.0 | CSW01_06485 | | PTS lactose/cellobiose transporter subunit IIA | 0.50 | 5 |
| Serratia liquefaciens MT49 | 0.62 | IAI46_03085 | | Na+/H+ antiporter NhaA | 0.45 | IAI46_09250 | | PTS lactose/cellobiose transporter subunit IIA | — | — |
| Rahnella sp. WP5 | 0.62 | EX31_RS03890 | | Na+/H+ antiporter NhaA | 0.52 | EX31_RS02275 | | PTS N,N'-diacetylchitobiose transporter subunit IIA | — | — |
| Klebsiella pneumoniae MRSN742743 | 0.59 | GJGHJB_04260 | nhaA | Na+/H+ antiporter NhaA | 0.52 | GJGHJB_01038 | celC | PEP-dependent phosphotransferase enzyme III | low | > 83 |
| Klebsiella pneumoniae MKP103 | 0.59 | KDGMDA_12585 | | Na+/H+ antiporter NhaA | 0.52 | KDGMDA_03075 | | PTS lactose/cellobiose transporter subunit IIA | low | > 94 |
| Escherichia coli Nissle 1917 | 0.57 | ECOLIN_RS00105 | | Na+/H+ antiporter NhaA | 0.49 | ECOLIN_RS09680 | | PTS N,N'-diacetylchitobiose transporter subunit IIA | — | — |
| Escherichia fergusonii Becca | 0.57 | EFB2_04024 | | Na(+)/H(+) antiporter NhaA | 0.49 | EFB2_02257 | | PTS system N,N'-diacetylchitobiose-specific EIIA component | low | > 86 |
| Pantoea agglomerans CFBP13505 P0401 | 0.56 | PagCFBP13516_RS16475 | nhaA | Na+/H+ antiporter NhaA | 0.38 | PagCFBP13516_RS04135 | | PTS lactose/cellobiose transporter subunit IIA | — | — |
| Klebsiella michiganensis M5al | 0.56 | BWI76_RS04315 | | Na+/H+ antiporter NhaA | 0.52 | BWI76_RS22410 | | PTS lactose/cellobiose transporter subunit IIA | low | > 92 |
| Enterobacter asburiae PDN3 | 0.56 | EX28DRAFT_3628 | | Na+/H+ antiporter NhaA | 0.49 | EX28DRAFT_1740 | | Phosphotransferase system cellobiose-specific component IIA | low | > 76 |
| Pantoea sp. MT58 | 0.55 | IAI47_16165 | | Na+/H+ antiporter NhaA | 0.39 | IAI47_03865 | | PTS lactose/cellobiose transporter subunit IIA | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF1119 | | Na+/H+ antiporter NhaA type | 0.51 | GFF3504 | | PTS system, cellobiose-specific IIA component (EC 2.7.1.69) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.55 | MPMX20_00722 | | Na(+)/H(+) antiporter NhaA | 0.53 | MPMX20_03740 | | PTS system N,N'-diacetylchitobiose-specific EIIA component | low | > 85 |
| Escherichia coli BL21 | 0.54 | ECD_00018 | | sodium-proton antiporter | 0.49 | ECD_01705 | | N,N'-diacetylchitobiose-specific enzyme IIA component of PTS | — | — |
| Escherichia coli ECRC62 | 0.54 | BNILDI_08245 | nhaA | Na+/H+ antiporter NhaA | 0.49 | BNILDI_16270 | chbA | PTS N,N'-diacetylchitobiose transporter subunit IIA | low | > 75 |
| Escherichia coli ECRC100 | 0.54 | OKFHMN_11030 | nhaA | Na+/H+ antiporter NhaA | 0.49 | OKFHMN_26970 | chbA | PTS N,N'-diacetylchitobiose transporter subunit IIA | low | > 79 |
| Escherichia coli ECRC99 | 0.54 | KEDOAH_17125 | nhaA | Na+/H+ antiporter NhaA | 0.49 | KEDOAH_01140 | chbA | PTS N,N'-diacetylchitobiose transporter subunit IIA | — | — |
| Escherichia coli ECRC102 | 0.54 | NIAGMN_08880 | nhaA | Na+/H+ antiporter NhaA | 0.49 | NIAGMN_01095 | chbA | PTS N,N'-diacetylchitobiose transporter subunit IIA | — | — |
| Escherichia coli ECRC101 | 0.54 | MCAODC_01545 | nhaA | Na+/H+ antiporter NhaA | 0.49 | MCAODC_18440 | chbA | PTS N,N'-diacetylchitobiose transporter subunit IIA | low | > 87 |
| Erwinia amylovora T8 | 0.54 | OLJFJH_01440 | | Na+/H+ antiporter NhaA | 0.43 | OLJFJH_07945 | | PTS lactose/cellobiose transporter subunit IIA | — | — |
| Escherichia coli ECRC98 | 0.54 | JDDGAC_14625 | nhaA | Na+/H+ antiporter NhaA | 0.49 | JDDGAC_01545 | chbA | PTS N,N'-diacetylchitobiose transporter subunit IIA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.54 | OHPLBJKB_03642 | | Na(+)/H(+) antiporter NhaA | 0.49 | OHPLBJKB_01996 | | 'PTS system N,N'-diacetylchitobiose-specific EIIA component' transl_table=11 | low | > 74 |
| Escherichia coli ECOR27 | 0.54 | NOLOHH_03360 | nhaA | Na+/H+ antiporter NhaA | 0.49 | NOLOHH_17485 | chbA | PTS N,N'-diacetylchitobiose transporter subunit IIA | — | — |
| Escherichia coli ECOR38 | 0.54 | HEPCGN_09015 | nhaA | Na+/H+ antiporter NhaA | 0.49 | HEPCGN_05335 | chbA | PTS N,N'-diacetylchitobiose transporter subunit IIA | low | > 88 |
| Escherichia coli BW25113 | 0.54 | b0019 | nhaA | pH-dependent sodium/proton antiporter (NCBI) | 0.49 | b1736 | chbA | N,N'-diacetylchitobiose-specific enzyme IIA component of PTS (NCBI) | — | — |
| Pectobacterium carotovorum WPP14 | 0.52 | HER17_RS02850 | | Na+/H+ antiporter NhaA | 0.47 | HER17_RS11830 | | PTS lactose/cellobiose transporter subunit IIA | — | — |
| Dickeya dadantii 3937 | 0.51 | DDA3937_RS18360 | | Na+/H+ antiporter NhaA | 0.46 | DDA3937_RS17415 | | PTS lactose/cellobiose transporter subunit IIA | — | — |
| Dickeya dianthicola ME23 | 0.50 | DZA65_RS19435 | | Na+/H+ antiporter NhaA | 0.45 | DZA65_RS17015 | | PTS lactose/cellobiose transporter subunit IIA | — | — |
| Dickeya dianthicola 67-19 | 0.50 | HGI48_RS18295 | | Na+/H+ antiporter NhaA | 0.44 | HGI48_RS17445 | | PTS lactose/cellobiose transporter subunit IIA | — | — |
Not shown: 51 genomes with orthologs for CSW01_08180 only; 0 genomes with orthologs for CSW01_06485 only