Conservation of cofitness between CSW01_00780 and CSW01_04555 in Vibrio cholerae E7946 ATCC 55056

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00780 hypothetical protein 1.0 CSW01_04555 tRNA pseudouridine(65) synthase TruC 0.43 8
Pectobacterium carotovorum WPP14 0.37 HER17_RS00970 YijD family membrane protein 0.63 HER17_RS16365 tRNA pseudouridine(65) synthase TruC low > 75
Escherichia coli Nissle 1917 0.36 ECOLIN_RS22895 YijD family membrane protein 0.65 ECOLIN_RS15550 tRNA pseudouridine(65) synthase TruC low > 55
Escherichia coli ECOR38 0.36 HEPCGN_12195 yijD YijD family membrane protein 0.65 HEPCGN_19465 truC tRNA pseudouridine(65) synthase TruC low > 88
Escherichia coli ECOR27 0.36 NOLOHH_05685 yijD YijD family membrane protein 0.65 NOLOHH_12090 truC tRNA pseudouridine(65) synthase TruC low > 76
Escherichia coli ECRC98 0.36 JDDGAC_17165 yijD YijD family membrane protein 0.65 JDDGAC_23875 truC tRNA pseudouridine(65) synthase TruC low > 87
Escherichia coli BL21 0.36 ECD_03849 DUF1422 family inner membrane protein 0.65 ECD_02636 tRNA(Ile1,Asp) pseudouridine(65) synthase low > 61
Escherichia coli ECRC102 0.36 NIAGMN_11290 yijD YijD family membrane protein 0.65 NIAGMN_17980 truC tRNA pseudouridine(65) synthase TruC low > 80
Escherichia coli ECRC99 0.36 KEDOAH_14620 yijD YijD family membrane protein 0.65 KEDOAH_07920 truC tRNA pseudouridine(65) synthase TruC — —
Escherichia coli ECRC100 0.36 OKFHMN_13540 yijD YijD family membrane protein 0.65 OKFHMN_20210 truC tRNA pseudouridine(65) synthase TruC low > 79
Escherichia coli BW25113 0.36 b3964 yijD conserved inner membrane protein (NCBI) 0.65 b2791 yqcB tRNA pseudouridine synthase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_04086 Inner membrane protein YijD 0.65 OHPLBJKB_00940 tRNA pseudouridine synthase C low > 74
Escherichia coli ECRC101 0.36 MCAODC_04040 yijD YijD family membrane protein 0.65 MCAODC_10735 truC tRNA pseudouridine(65) synthase TruC low > 88
Escherichia fergusonii Becca 0.36 EFB2_04646 Inner membrane protein YijD 0.65 EFB2_01126 tRNA pseudouridine synthase C low > 86
Escherichia coli ECRC62 0.36 BNILDI_05840 yijD YijD family membrane protein 0.65 BNILDI_10595 truC tRNA pseudouridine(65) synthase TruC low > 75
Dickeya dianthicola 67-19 0.36 HGI48_RS20390 YijD family membrane protein 0.64 HGI48_RS05085 tRNA pseudouridine(65) synthase TruC low > 71
Dickeya dianthicola ME23 0.36 DZA65_RS21435 YijD family membrane protein 0.64 DZA65_RS05425 tRNA pseudouridine(65) synthase TruC low > 75
Serratia liquefaciens MT49 0.35 IAI46_24460 YijD family membrane protein 0.66 IAI46_20290 tRNA pseudouridine(65) synthase TruC low > 86
Dickeya dadantii 3937 0.35 DDA3937_RS00985 YijD family membrane protein 0.64 DDA3937_RS05085 tRNA pseudouridine(65) synthase TruC low > 74
Enterobacter asburiae PDN3 0.35 EX28DRAFT_4427 Protein of unknown function (DUF1422) 0.65 EX28DRAFT_2872 Pseudouridylate synthases, 23S RNA-specific — —
Klebsiella michiganensis M5al 0.35 BWI76_RS00880 membrane protein 0.66 BWI76_RS22850 tRNA pseudouridine synthase TruC low > 92
Enterobacter sp. TBS_079 0.34 MPMX20_04516 Inner membrane protein YijD 0.64 MPMX20_03661 tRNA pseudouridine synthase C low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF2350 Putative inner membrane protein 0.64 GFF4846 tRNA pseudouridine synthase C (EC 4.2.1.70) low > 78
Rahnella sp. WP5 0.32 EX31_RS14155 YijD family membrane protein 0.63 EX31_RS13065 tRNA pseudouridine(65) synthase TruC low > 89
Erwinia amylovora T8 0.31 OLJFJH_06155 YijD family membrane protein 0.65 OLJFJH_09220 tRNA pseudouridine(65) synthase TruC low > 58
Pantoea agglomerans CFBP13505 P0401 0.31 PagCFBP13505_RS18395 YijD family membrane protein 0.67 PagCFBP13505_RS16905 tRNA pseudouridine(65) synthase TruC low > 74
Klebsiella pneumoniae MKP103 0.31 KDGMDA_09395 YijD family membrane protein 0.65 KDGMDA_03375 tRNA pseudouridine(65) synthase TruC low > 95
Pantoea sp. MT58 0.31 IAI47_00945 YijD family membrane protein 0.67 IAI47_04065 tRNA pseudouridine(65) synthase TruC low > 76

Not shown: 0 genomes with orthologs for CSW01_00780 only; 23 genomes with orthologs for CSW01_04555 only