Conservation of cofitness between CSW01_13435 and CSW01_02815 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13435 fumarate reductase subunit C 1.0 CSW01_02815 tRNA pseudouridine(13) synthase TruD 0.56 8
Escherichia fergusonii Becca 0.45 EFB2_04381 Fumarate reductase subunit C 0.36 EFB2_01165 tRNA pseudouridine synthase D low > 86
Escherichia coli ECRC101 0.45 MCAODC_02865 Fumarate reductase subunit C 0.36 MCAODC_11000 truD tRNA pseudouridine(13) synthase TruD low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_03888 Fumarate reductase subunit C 0.36 OHPLBJKB_00988 tRNA pseudouridine synthase D low > 74
Escherichia coli ECRC102 0.45 NIAGMN_10200 Fumarate reductase subunit C 0.36 NIAGMN_18245 truD tRNA pseudouridine(13) synthase TruD low > 80
Escherichia coli ECOR27 0.45 NOLOHH_04615 Fumarate reductase subunit C 0.36 NOLOHH_12290 truD tRNA pseudouridine(13) synthase TruD low > 76
Escherichia coli ECRC62 0.45 BNILDI_06875 Fumarate reductase subunit C 0.36 BNILDI_10840 truD tRNA pseudouridine(13) synthase TruD low > 75
Escherichia coli ECRC98 0.45 JDDGAC_15990 Fumarate reductase subunit C 0.36 JDDGAC_24140 truD tRNA pseudouridine(13) synthase TruD low > 87
Escherichia coli BW25113 0.45 b4152 frdC fumarate reductase subunit C (NCBI) 0.36 b2745 truD tRNA pseudouridine synthase D (NCBI) low > 76
Escherichia coli Nissle 1917 0.45 ECOLIN_RS24140 fumarate reductase subunit FrdC 0.36 ECOLIN_RS15350 tRNA pseudouridine(13) synthase TruD — —
Escherichia coli BL21 0.45 ECD_04024 fumarate reductase (anaerobic), membrane anchor subunit 0.36 ECD_02595 tRNA(Glu) pseudouridine(13) synthase low > 61
Escherichia coli ECRC99 0.45 KEDOAH_15810 Fumarate reductase subunit C 0.36 KEDOAH_07665 truD tRNA pseudouridine(13) synthase TruD — —
Escherichia coli ECRC100 0.45 OKFHMN_12355 Fumarate reductase subunit C 0.36 OKFHMN_20475 truD tRNA pseudouridine(13) synthase TruD low > 79
Escherichia coli ECOR38 0.45 HEPCGN_10580 Fumarate reductase subunit C 0.36 HEPCGN_19655 truD tRNA pseudouridine(13) synthase TruD low > 88
Enterobacter asburiae PDN3 0.43 EX28DRAFT_3353 Fumarate reductase subunit C 0.36 EX28DRAFT_2841 tRNA pseudouridine synthase, TruD family low > 76
Klebsiella michiganensis M5al 0.42 BWI76_RS02445 fumarate reductase subunit C 0.35 BWI76_RS22665 tRNA pseudouridine(13) synthase TruD low > 92
Klebsiella pneumoniae MKP103 0.42 KDGMDA_10940 fumarate reductase subunit FrdC 0.36 KDGMDA_03240 tRNA pseudouridine(13) synthase TruD low > 95
Enterobacter sp. TBS_079 0.41 MPMX20_00435 Fumarate reductase subunit C 0.34 MPMX20_03631 tRNA pseudouridine synthase D low > 85
Serratia liquefaciens MT49 0.40 IAI46_01540 fumarate reductase subunit FrdC 0.39 IAI46_03765 tRNA pseudouridine(13) synthase TruD low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF1998 Fumarate reductase subunit C 0.36 GFF4793 tRNA pseudouridine 13 synthase (EC 4.2.1.-) low > 78
Rahnella sp. WP5 0.39 EX31_RS08910 fumarate reductase subunit FrdC 0.37 EX31_RS07845 tRNA pseudouridine(13) synthase TruD low > 89
Pectobacterium carotovorum WPP14 0.38 HER17_RS02380 fumarate reductase subunit FrdC 0.36 HER17_RS04335 tRNA pseudouridine(13) synthase TruD low > 75
Erwinia tracheiphila SCR3 0.36 LU632_RS01910 frdC fumarate reductase subunit FrdC 0.35 LU632_RS06460 truD tRNA pseudouridine(13) synthase TruD low > 74
Erwinia tracheiphila HP pepo 2.2 0.36 IJEDHG_07005 frdC fumarate reductase subunit FrdC 0.35 IJEDHG_17480 truD tRNA pseudouridine(13) synthase TruD low > 61
Dickeya dianthicola ME23 0.35 DZA65_RS20190 fumarate reductase subunit FrdC 0.37 DZA65_RS18035 tRNA pseudouridine(13) synthase TruD low > 75
Dickeya dianthicola 67-19 0.35 HGI48_RS19070 fumarate reductase subunit FrdC 0.37 HGI48_RS16960 tRNA pseudouridine(13) synthase TruD low > 71
Dickeya dadantii 3937 0.35 DDA3937_RS18975 fumarate reductase subunit FrdC 0.38 DDA3937_RS16890 tRNA pseudouridine(13) synthase TruD low > 74

Not shown: 1 genomes with orthologs for CSW01_13435 only; 37 genomes with orthologs for CSW01_02815 only