Conservation of cofitness between CSW01_04065 and CSW01_02665 in Vibrio cholerae E7946 ATCC 55056

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04065 D-amino acid dehydrogenase small subunit 1.0 CSW01_02665 peptidase M23 0.45 17
Pantoea sp. MT58 0.57 IAI47_08890 D-amino acid dehydrogenase 0.34 IAI47_08470 murein DD-endopeptidase MepM low > 76
Pantoea agglomerans CFBP13505 P0401 0.57 PagCFBP13505_RS02725 D-amino acid dehydrogenase 0.35 PagCFBP13505_RS02350 murein DD-endopeptidase MepM low > 74
Erwinia amylovora T8 0.57 OLJFJH_13160 D-amino acid dehydrogenase 0.33 OLJFJH_12880 murein DD-endopeptidase MepM low > 58
Serratia liquefaciens MT49 0.56 IAI46_14460 D-amino acid dehydrogenase 0.32 IAI46_14600 murein DD-endopeptidase MepM low > 86
Erwinia tracheiphila SCR3 0.56 LU632_RS13070 D-amino acid dehydrogenase 0.32 LU632_RS13390 mepM murein DD-endopeptidase MepM low > 74
Rahnella sp. WP5 0.56 EX31_RS10485 D-amino acid dehydrogenase 0.32 EX31_RS10670 murein DD-endopeptidase MepM 0.35 33
Erwinia tracheiphila HP pepo 2.2 0.56 IJEDHG_22535 D-amino acid dehydrogenase 0.32 IJEDHG_22160 mepM murein DD-endopeptidase MepM low > 61
Pectobacterium carotovorum WPP14 0.56 HER17_RS11170 D-amino acid dehydrogenase 0.31 HER17_RS11800 murein DD-endopeptidase MepM low > 75
Enterobacter asburiae PDN3 0.55 EX28DRAFT_0766 Glycine/D-amino acid oxidases (deaminating) 0.31 EX28DRAFT_0700 Membrane proteins related to metalloendopeptidases low > 76
Escherichia coli BL21 0.55 ECD_01164 D-amino acid dehydrogenase 0.31 ECD_01827 murein DD-endopeptidase, space-maker hydrolase, septation protein low > 61
Escherichia fergusonii Becca 0.55 EFB2_02743 D-amino acid dehydrogenase 0.31 EFB2_02086 Murein DD-endopeptidase MepM low > 86
Escherichia coli ECOR38 0.55 HEPCGN_24750 dadA D-amino acid dehydrogenase 0.31 HEPCGN_04715 mepM murein DD-endopeptidase MepM low > 88
Escherichia coli ECRC101 0.55 MCAODC_21880 dadA D-amino acid dehydrogenase 0.31 MCAODC_19095 mepM murein DD-endopeptidase MepM low > 88
Escherichia coli Nissle 1917 0.55 ECOLIN_RS07185 D-amino acid dehydrogenase 0.31 ECOLIN_RS10340 murein DD-endopeptidase MepM — —
Escherichia coli ECRC99 0.55 KEDOAH_25305 dadA D-amino acid dehydrogenase 0.31 KEDOAH_01795 mepM murein DD-endopeptidase MepM — —
Escherichia coli BW25113 0.55 b1189 dadA D-amino acid dehydrogenase (quinone) DadA (EC 1.4.5.1) (from data) 0.31 b1856 yebA orf, hypothetical protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_02500 D-amino acid dehydrogenase 0.31 OHPLBJKB_01872 Murein DD-endopeptidase MepM low > 74
Escherichia coli ECRC62 0.55 BNILDI_18890 dadA D-amino acid dehydrogenase 0.31 BNILDI_15540 mepM murein DD-endopeptidase MepM low > 75
Escherichia coli ECRC98 0.55 JDDGAC_06220 dadA D-amino acid dehydrogenase 0.31 JDDGAC_00885 mepM murein DD-endopeptidase MepM — —
Escherichia coli ECRC100 0.55 OKFHMN_28290 dadA D-amino acid dehydrogenase 0.31 OKFHMN_26310 mepM murein DD-endopeptidase MepM — —
Escherichia coli ECOR27 0.55 NOLOHH_20725 dadA D-amino acid dehydrogenase 0.31 NOLOHH_16750 mepM murein DD-endopeptidase MepM low > 76
Escherichia coli ECRC102 0.55 NIAGMN_27930 dadA D-amino acid dehydrogenase 0.31 NIAGMN_01750 mepM murein DD-endopeptidase MepM low > 80
Enterobacter sp. TBS_079 0.55 MPMX20_02699 D-amino acid dehydrogenase 0.30 MPMX20_02761 Murein DD-endopeptidase MepM low > 85

Not shown: 71 genomes with orthologs for CSW01_04065 only; 0 genomes with orthologs for CSW01_02665 only