Conservation of cofitness between CSW01_07800 and CSW01_02100 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07800 sn-glycerol-3-phosphate import ATP-binding protein UgpC 1.0 CSW01_02100 RNase E specificity factor CsrD 0.59 13
Serratia liquefaciens MT49 0.44 IAI46_01005 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.29 IAI46_22725 RNase E specificity factor CsrD low > 87
Dickeya dianthicola ME23 0.42 DZA65_RS21650 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.26 DZA65_RS01405 RNase E specificity factor CsrD low > 75
Dickeya dianthicola 67-19 0.42 HGI48_RS20635 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.26 HGI48_RS01345 RNase E specificity factor CsrD low > 71
Dickeya dadantii 3937 0.42 DDA3937_RS00735 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.25 DDA3937_RS01425 RNase E specificity factor CsrD low > 74
Escherichia coli ECRC62 0.42 BNILDI_02930 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.25 BNILDI_02015 csrD RNase E specificity factor CsrD low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_00253 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.25 OHPLBJKB_00453 RNase E specificity factor CsrD 0.25 61
Escherichia coli ECOR27 0.42 NOLOHH_08575 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.25 NOLOHH_09505 csrD RNase E specificity factor CsrD low > 76
Erwinia amylovora T8 0.42 OLJFJH_04315 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC 0.22 OLJFJH_06905 RNase E specificity factor CsrD low > 58
Escherichia coli BW25113 0.42 b3450 ugpC ATP-binding component of sn-glycerol 3-phosphate transport system (VIMSS) 0.25 b3252 yhdA conserved inner membrane protein (NCBI) low > 76
Escherichia coli ECRC98 0.42 JDDGAC_20415 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.25 JDDGAC_21345 csrD RNase E specificity factor CsrD low > 87
Escherichia coli ECRC99 0.42 KEDOAH_11355 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.25 KEDOAH_10430 csrD RNase E specificity factor CsrD — —
Escherichia coli BL21 0.42 ECD_03299 sn-glycerol-3-phosphate ABC transporter ATPase 0.25 ECD_03111 targeting factor for csrBC sRNA degradation low > 61
Rahnella sp. WP5 0.42 EX31_RS14745 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.26 EX31_RS12230 RNase E specificity factor CsrD low > 89
Escherichia coli Nissle 1917 0.42 ECOLIN_RS19730 sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.25 ECOLIN_RS18635 RNase E specificity factor CsrD low > 55
Escherichia coli ECRC102 0.42 NIAGMN_14555 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.25 NIAGMN_15480 csrD RNase E specificity factor CsrD low > 80
Escherichia coli ECOR38 0.42 HEPCGN_15605 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.25 HEPCGN_16585 csrD RNase E specificity factor CsrD low > 88
Escherichia fergusonii Becca 0.42 EFB2_00372 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.25 EFB2_00579 RNase E specificity factor CsrD low > 86
Escherichia coli ECRC100 0.42 OKFHMN_16785 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.25 OKFHMN_17720 csrD RNase E specificity factor CsrD low > 79
Escherichia coli ECRC101 0.42 MCAODC_07315 ugpC sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC 0.25 MCAODC_08240 csrD RNase E specificity factor CsrD 0.29 42
Enterobacter sp. TBS_079 0.42 MPMX20_04326 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.25 MPMX20_04158 RNase E specificity factor CsrD low > 85
Pantoea sp. MT58 0.42 IAI47_01605 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.22 IAI47_02430 RNase E specificity factor CsrD low > 76
Klebsiella michiganensis M5al 0.42 BWI76_RS26290 glycerol-3-phosphate ABC transporter ATP-binding protein 0.24 BWI76_RS25505 RNase E specificity factor CsrD low > 92
Pantoea agglomerans CFBP13505 P0401 0.41 PagCFBP13505_RS18120 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.22 PagCFBP13505_RS11025 RNase E specificity factor CsrD low > 74
Enterobacter asburiae PDN3 0.41 EX28DRAFT_4282 ABC-type sugar transport systems, ATPase components 0.26 EX28DRAFT_3302 diguanylate cyclase (GGDEF) domain low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF558 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3) 0.24 GFF2133 RNase E specificity factor CsrD low > 78
Klebsiella pneumoniae MKP103 0.41 KDGMDA_07165 sn-glycerol-3-phosphate import ATP-binding protein UgpC 0.23 KDGMDA_06280 Lipoprotein low > 95

Not shown: 32 genomes with orthologs for CSW01_07800 only; 7 genomes with orthologs for CSW01_02100 only