Conservation of cofitness between CSW01_00790 and CSW01_02100 in Vibrio cholerae E7946 ATCC 55056

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00790 vitamin B12 transporter BtuB 1.0 CSW01_02100 RNase E specificity factor CsrD 0.74 19
Dickeya dadantii 3937 0.32 DDA3937_RS00995 TonB-dependent vitamin B12 receptor BtuB 0.25 DDA3937_RS01425 RNase E specificity factor CsrD low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF2352 Outer membrane vitamin B12 receptor BtuB 0.24 GFF2133 RNase E specificity factor CsrD 0.52 62
Escherichia coli Nissle 1917 0.31 ECOLIN_RS22905 TonB-dependent vitamin B12 receptor BtuB 0.25 ECOLIN_RS18635 RNase E specificity factor CsrD low > 55
Pantoea agglomerans CFBP13505 P0401 0.31 PagCFBP13505_RS18385 TonB-dependent vitamin B12 receptor BtuB 0.22 PagCFBP13505_RS11025 RNase E specificity factor CsrD low > 74
Escherichia coli ECOR27 0.30 NOLOHH_05675 btuB TonB-dependent vitamin B12 receptor BtuB 0.25 NOLOHH_09505 csrD RNase E specificity factor CsrD 0.58 69
Escherichia coli ECRC101 0.30 MCAODC_04030 btuB TonB-dependent vitamin B12 receptor BtuB 0.25 MCAODC_08240 csrD RNase E specificity factor CsrD low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_04084 Vitamin B12 transporter BtuB 0.25 OHPLBJKB_00453 RNase E specificity factor CsrD low > 74
Escherichia coli ECRC62 0.30 BNILDI_05850 btuB TonB-dependent vitamin B12 receptor BtuB 0.25 BNILDI_02015 csrD RNase E specificity factor CsrD low > 75
Escherichia coli BW25113 0.30 b3966 btuB vitamin B12/cobalamin outer membrane transporter (NCBI) 0.25 b3252 yhdA conserved inner membrane protein (NCBI) low > 76
Escherichia coli ECRC100 0.30 OKFHMN_13530 btuB TonB-dependent vitamin B12 receptor BtuB 0.25 OKFHMN_17720 csrD RNase E specificity factor CsrD low > 79
Escherichia coli ECRC99 0.30 KEDOAH_14630 btuB TonB-dependent vitamin B12 receptor BtuB 0.25 KEDOAH_10430 csrD RNase E specificity factor CsrD — —
Escherichia coli ECRC102 0.30 NIAGMN_11280 btuB TonB-dependent vitamin B12 receptor BtuB 0.25 NIAGMN_15480 csrD RNase E specificity factor CsrD low > 80
Escherichia coli ECRC98 0.30 JDDGAC_17155 btuB TonB-dependent vitamin B12 receptor BtuB 0.25 JDDGAC_21345 csrD RNase E specificity factor CsrD low > 87
Escherichia coli ECOR38 0.30 HEPCGN_12185 btuB TonB-dependent vitamin B12 receptor BtuB 0.25 HEPCGN_16585 csrD RNase E specificity factor CsrD low > 88
Enterobacter asburiae PDN3 0.30 EX28DRAFT_4429 TonB-dependent vitamin B12 receptor 0.26 EX28DRAFT_3302 diguanylate cyclase (GGDEF) domain low > 76
Dickeya dianthicola ME23 0.30 DZA65_RS21425 TonB-dependent vitamin B12 receptor BtuB 0.26 DZA65_RS01405 RNase E specificity factor CsrD low > 75
Serratia liquefaciens MT49 0.30 IAI46_24450 TonB-dependent vitamin B12 receptor BtuB 0.29 IAI46_22725 RNase E specificity factor CsrD low > 87
Pectobacterium carotovorum WPP14 0.29 HER17_RS00980 TonB-dependent vitamin B12 receptor BtuB 0.25 HER17_RS20175 RNase E specificity factor CsrD low > 75
Klebsiella michiganensis M5al 0.29 BWI76_RS00890 vitamin B12/cobalamin outer membrane transporter 0.24 BWI76_RS25505 RNase E specificity factor CsrD low > 92
Rahnella sp. WP5 0.29 EX31_RS14135 TonB-dependent vitamin B12 receptor BtuB 0.26 EX31_RS12230 RNase E specificity factor CsrD low > 89
Pantoea sp. MT58 0.29 IAI47_00955 TonB-dependent vitamin B12 receptor BtuB 0.22 IAI47_02430 RNase E specificity factor CsrD low > 76
Klebsiella pneumoniae MKP103 0.29 KDGMDA_09405 TonB-dependent vitamin B12 receptor BtuB 0.23 KDGMDA_06280 Lipoprotein low > 95
Dickeya dianthicola 67-19 0.28 HGI48_RS20380 TonB-dependent vitamin B12 receptor BtuB 0.26 HGI48_RS01345 RNase E specificity factor CsrD low > 71
Enterobacter sp. TBS_079 0.28 MPMX20_04514 Vitamin B12 transporter BtuB 0.25 MPMX20_04158 RNase E specificity factor CsrD low > 85
Escherichia fergusonii Becca 0.28 EFB2_04644 Vitamin B12 transporter BtuB 0.25 EFB2_00579 RNase E specificity factor CsrD low > 86

Not shown: 57 genomes with orthologs for CSW01_00790 only; 8 genomes with orthologs for CSW01_02100 only