| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_18780 | | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 1.0 | CSW01_01280 | | GDP-mannose 4,6-dehydratase | 0.73 | 19 |
| Pantoea sp. MT58 | 0.55 | IAI47_13020 | | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.11 | IAI47_18500 | | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_22305 | rlmC | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.83 | NOLOHH_15675 | | GDP-mannose 4,6-dehydratase | low | > 76 |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_02095 | rlmC | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.83 | HEPCGN_03045 | | GDP-mannose 4,6-dehydratase | low | > 88 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_02809 | | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.10 | OHPLBJKB_04266 | | dTDP-glucose 4,6-dehydratase 2 | low | > 74 |
| Escherichia fergusonii Becca | 0.55 | EFB2_03202 | | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.83 | EFB2_01801 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_21975 | rlmC | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.83 | KEDOAH_03710 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_03980 | rlmC | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.83 | NIAGMN_22385 | | GDP-mannose 4,6-dehydratase | low | > 80 |
| Escherichia coli ECRC101 | 0.55 | MCAODC_25150 | rlmC | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.83 | MCAODC_20500 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS04575 | | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.82 | ECOLIN_RS12095 | | GDP-mannose 4,6-dehydratase | low | > 55 |
| Escherichia coli ECRC100 | 0.55 | OKFHMN_05935 | rlmC | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.83 | OKFHMN_24440 | | GDP-mannose 4,6-dehydratase | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.54 | PagCFBP13505_RS04310 | | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.46 | PagCFBP13505_RS01140 | | GDP-mannose 4,6-dehydratase | low | > 74 |
| Escherichia coli ECRC98 | 0.54 | JDDGAC_09570 | rlmC | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.83 | JDDGAC_28550 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC62 | 0.54 | BNILDI_20560 | rlmC | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.83 | BNILDI_14585 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Escherichia coli BL21 | 0.54 | ECD_00864 | | 23S rRNA m(5)U747 methyltransferase, SAM-dependent | 0.83 | ECD_01959 | | GDP-D-mannose dehydratase, NAD(P)-binding | low | > 61 |
| Escherichia coli BW25113 | 0.54 | b0859 | rumB | 23S rRNA m(5)U747-methyltransferase (NCBI) | 0.83 | b2053 | gmd | GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.53 | MPMX20_01500 | | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.82 | MPMX20_03035 | | GDP-mannose 4,6-dehydratase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.53 | EX28DRAFT_2094 | | 23S rRNA (uracil-5-)-methyltransferase RumB | 0.83 | EX28DRAFT_0502 | | GDP-mannose 4,6-dehydratase | low | > 76 |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS09485 | | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.87 | DDA3937_RS18665 | | GDP-mannose 4,6-dehydratase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.52 | HGI48_RS09505 | | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.87 | HGI48_RS18595 | | GDP-mannose 4,6-dehydratase | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.52 | HER17_RS12475 | | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.78 | HER17_RS14540 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Dickeya dianthicola ME23 | 0.52 | DZA65_RS09815 | | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.87 | DZA65_RS19730 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.51 | GFF763 | | 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) | 0.83 | GFF3875 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 78 |
| Rahnella sp. WP5 | 0.51 | EX31_RS09605 | | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | 0.52 | EX31_RS02865 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Parabacteroides merdae CL09T00C40 | 0.16 | HMPREF1078_RS02375 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.63 | HMPREF1078_RS00185 | | GDP-mannose 4,6-dehydratase | low | > 61 |
| Bacteroides ovatus ATCC 8483 | 0.15 | BACOVA_02267 | | 23S rRNA (uracil-5-)-methyltransferase RumA | 0.60 | BACOVA_00511 | | GDP-mannose 4,6-dehydratase | low | > 96 |
Not shown: 9 genomes with orthologs for CSW01_18780 only; 64 genomes with orthologs for CSW01_01280 only