Conservation of cofitness between CSW01_00255 and CSW01_00425 in Vibrio cholerae E7946 ATCC 55056

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00255 DNA topoisomerase 1.0 CSW01_00425 universal stress protein B 0.39 15
Enterobacter sp. TBS_079 0.53 MPMX20_04191 DNA topoisomerase 1 0.47 MPMX20_04394 Universal stress protein B low > 85
Klebsiella pneumoniae MKP103 0.53 KDGMDA_06525 Uncharacterized protein YrdD 0.48 KDGMDA_07405 universal stress protein UspB low > 95
Enterobacter asburiae PDN3 0.53 EX28DRAFT_0044 Zn-finger domain associated with topoisomerase type I 0.47 EX28DRAFT_4066 Universal stress protein B (UspB) low > 76
Rahnella sp. WP5 0.53 EX31_RS15960 hypothetical protein 0.47 EX31_RS05150 universal stress protein UspB low > 89
Klebsiella michiganensis M5al 0.52 BWI76_RS25655 DNA topoisomerase type IA zn finger domain-containing protein 0.47 BWI76_RS26575 universal stress protein B low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF2395 Similar to C-terminal Zn-finger domain of DNA topoisomerase I 0.42 GFF521 Universal stress protein B low > 78
Escherichia fergusonii Becca 0.51 EFB2_00540 DNA topoisomerase 1 0.49 EFB2_00321 Universal stress protein B low > 86
Escherichia coli ECOR27 0.51 NOLOHH_09345 yrdD Uncharacterized protein YrdD 0.49 NOLOHH_08370 uspB universal stress protein UspB low > 76
Escherichia coli ECOR38 0.51 HEPCGN_16375 yrdD Uncharacterized protein YrdD 0.49 HEPCGN_15350 uspB universal stress protein UspB low > 88
Escherichia coli Nissle 1917 0.51 ECOLIN_RS18850 type I DNA topoisomerase 0.49 ECOLIN_RS19965 universal stress protein UspB low > 55
Escherichia coli ECRC62 0.51 BNILDI_02175 yrdD Uncharacterized protein YrdD 0.49 BNILDI_03190 uspB universal stress protein UspB low > 75
Escherichia coli ECRC102 0.51 NIAGMN_15315 yrdD Uncharacterized protein YrdD 0.49 NIAGMN_14200 uspB universal stress protein UspB low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_00420 DNA topoisomerase 1 0.49 OHPLBJKB_00209 Universal stress protein B low > 74
Escherichia coli ECRC98 0.51 JDDGAC_21175 yrdD Uncharacterized protein YrdD 0.49 JDDGAC_20065 uspB universal stress protein UspB low > 87
Escherichia coli BW25113 0.51 b3283 yrdD predicted DNA topoisomerase (NCBI) 0.49 b3494 yhiO universal stress protein UspB (NCBI) low > 76
Escherichia coli ECRC99 0.51 KEDOAH_10595 yrdD Uncharacterized protein YrdD 0.49 KEDOAH_11710 uspB universal stress protein UspB
Escherichia coli BL21 0.51 ECD_03134 ssDNA-binding protein, function unknown 0.49 ECD_03343 universal stress (ethanol tolerance) protein B low > 61
Pectobacterium carotovorum WPP14 0.51 HER17_RS02240 topoisomerase DNA-binding C4 zinc finger domain-containing protein 0.48 HER17_RS21330 universal stress protein UspB low > 75
Escherichia coli ECRC100 0.51 OKFHMN_17555 yrdD Uncharacterized protein YrdD 0.49 OKFHMN_16435 uspB universal stress protein UspB low > 79
Escherichia coli ECRC101 0.51 MCAODC_08075 yrdD Uncharacterized protein YrdD 0.49 MCAODC_06950 uspB universal stress protein UspB low > 87
Serratia liquefaciens MT49 0.50 IAI46_23250 topoisomerase DNA-binding C4 zinc finger domain-containing protein 0.48 IAI46_24155 universal stress protein UspB low > 87
Erwinia amylovora T8 0.49 OLJFJH_03695 DNA topoisomerase I ssDNA-binding Zn-finger and Zn-ribbon domains 0.46 OLJFJH_04515 universal stress protein UspB low > 58
Pantoea agglomerans CFBP13505 P0401 0.49 PagCFBP13505_RS22550 hypothetical protein 0.47 PagCFBP13505_RS17860 universal stress protein UspB low > 74
Pantoea sp. MT58 0.49 IAI47_02305 topoisomerase DNA-binding C4 zinc finger domain-containing protein 0.47 IAI47_01360 universal stress protein UspB low > 76
Dickeya dadantii 3937 0.47 DDA3937_RS22495 topoisomerase DNA-binding C4 zinc finger domain-containing protein 0.48 DDA3937_RS00350 universal stress protein UspB low > 74
Dickeya dianthicola ME23 0.47 DZA65_RS20325 hypothetical protein 0.48 DZA65_RS22000 universal stress protein UspB low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS19200 topoisomerase DNA-binding C4 zinc finger domain-containing protein 0.48 HGI48_RS21015 universal stress protein UspB low > 71

Not shown: 7 genomes with orthologs for CSW01_00255 only; 0 genomes with orthologs for CSW01_00425 only