Conservation of cofitness between CSW01_17605 and CSW01_00385 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17605 DNA-binding response regulator 1.0 CSW01_00385 transcriptional regulator AsnC 0.49 6
Pectobacterium carotovorum WPP14 0.60 HER17_RS14245 response regulator transcription factor 0.68 HER17_RS21590 transcriptional regulator AsnC low > 75
Klebsiella michiganensis M5al 0.57 BWI76_RS06060 DNA-binding response regulator 0.68 BWI76_RS00245 transcriptional regulator AsnC low > 92
Escherichia coli ECRC98 0.55 JDDGAC_12360 citB DNA-binding response regulator 0.68 JDDGAC_18395 asnC transcriptional regulator AsnC low > 87
Escherichia coli ECRC101 0.55 MCAODC_27935 citB DNA-binding response regulator 0.68 MCAODC_05280 asnC transcriptional regulator AsnC low > 88
Escherichia coli ECRC102 0.55 NIAGMN_06760 citB DNA-binding response regulator 0.68 NIAGMN_12530 asnC transcriptional regulator AsnC low > 80
Escherichia coli ECRC100 0.55 OKFHMN_08705 citB DNA-binding response regulator 0.68 OKFHMN_14775 asnC transcriptional regulator AsnC 0.50 33
Escherichia coli ECRC99 0.55 KEDOAH_19265 citB DNA-binding response regulator 0.68 KEDOAH_13375 asnC transcriptional regulator AsnC — —
Enterobacter asburiae PDN3 0.45 EX28DRAFT_3952 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 0.70 EX28DRAFT_4019 Transcriptional regulators low > 76
Escherichia coli Nissle 1917 0.45 ECOLIN_RS21160 transcriptional regulator UhpA 0.68 ECOLIN_RS21525 transcriptional regulator AsnC low > 55
Escherichia coli ECOR38 0.45 HEPCGN_13905 uhpA_G97D DNA-binding response regulator UhpA 0.68 HEPCGN_13490 asnC transcriptional regulator AsnC low > 88
Escherichia coli ECOR27 0.45 NOLOHH_07335 uhpA_G97D DNA-binding response regulator UhpA 0.68 NOLOHH_06910 asnC transcriptional regulator AsnC low > 76
Escherichia coli BL21 0.45 ECD_03553 response regulator in two-component regulatory system wtih UhpB 0.68 ECD_03627 transcriptional activator of asnA; autorepressor low > 61
Escherichia fergusonii Becca 0.45 EFB2_00029 Transcriptional regulatory protein UhpA 0.68 EFB2_04890 Regulatory protein AsnC low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_00031 Transcriptional regulatory protein UhpA 0.68 OHPLBJKB_04310 Regulatory protein AsnC low > 74
Escherichia coli ECRC62 0.45 BNILDI_04190 uhpA_G97D DNA-binding response regulator UhpA 0.68 BNILDI_04615 asnC transcriptional regulator AsnC low > 75
Escherichia coli BW25113 0.45 b3669 uhpA DNA-binding response regulator in two-component regulatory system wtih UhpB (NCBI) 0.68 b3743 asnC DNA-binding transcriptional dual regulator (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF304 Transcriptional regulatory protein UhpA 0.67 GFF1714 Regulatory protein AsnC low > 78
Klebsiella pneumoniae MKP103 0.44 KDGMDA_08505 transcriptional regulator UhpA 0.66 KDGMDA_08850 transcriptional regulator AsnC low > 95
Enterobacter sp. TBS_079 0.44 MPMX20_00033 Transcriptional regulatory protein UhpA 0.70 MPMX20_04624 Regulatory protein AsnC low > 85
Dickeya dianthicola 67-19 0.44 HGI48_RS02840 transcriptional regulator UhpA 0.72 HGI48_RS21370 transcriptional regulator AsnC low > 71
Dickeya dianthicola ME23 0.44 DZA65_RS03015 transcriptional regulator UhpA 0.72 DZA65_RS22350 transcriptional regulator AsnC low > 75
Dickeya dadantii 3937 0.44 DDA3937_RS02865 transcriptional regulator UhpA 0.72 DDA3937_RS00010 transcriptional regulator AsnC low > 74
Pantoea agglomerans CFBP13505 P0401 0.42 PagCFBP13505_RS08630 transcriptional regulator UhpA 0.71 PagCFBP13505_RS19025 transcriptional regulator AsnC low > 74
Serratia liquefaciens MT49 0.42 IAI46_00435 transcriptional regulator UhpA 0.70 IAI46_25100 transcriptional regulator AsnC low > 86
Rhodanobacter sp000427505 FW510-R12 0.34 LRK53_RS11405 response regulator transcription factor 0.23 LRK53_RS03530 Lrp/AsnC family transcriptional regulator — —
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS24135 DNA-binding response regulator 0.47 CA265_RS18950 transcriptional regulator low > 88
Bacteroides ovatus ATCC 8483 0.17 BACOVA_05544 transcriptional regulator, LuxR family 0.37 BACOVA_00664 transcriptional regulator, AsnC family low > 96
Phocaeicola vulgatus CL09T03C04 0.14 HMPREF1058_RS02885 response regulator transcription factor 0.36 HMPREF1058_RS12070 Lrp/AsnC ligand binding domain-containing protein low > 67
Phocaeicola dorei CL03T12C01 0.14 ABI39_RS02195 response regulator transcription factor 0.36 ABI39_RS04730 Lrp/AsnC ligand binding domain-containing protein low > 72

Not shown: 9 genomes with orthologs for CSW01_17605 only; 22 genomes with orthologs for CSW01_00385 only