Conservation of cofitness between BNILDI_15750 and BNILDI_21805 in Escherichia coli ECRC62

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_15750 yebT lipid-binding membrane homeostasis protein YebT 1.0 BNILDI_21805 cspE transcription antiterminator/RNA stability regulator CspE 0.60 20
Escherichia coli ECOR27 1.00 NOLOHH_16955 yebT lipid-binding membrane homeostasis protein YebT 1.00 NOLOHH_23795 cspE transcription antiterminator/RNA stability regulator CspE low > 75
Escherichia coli BL21 1.00 ECD_01805 MCE domain protein 1.00 ECD_00593 constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01897 hypothetical protein 1.00 OHPLBJKB_03082 Cold shock-like protein CspE low > 73
Escherichia coli BW25113 1.00 b1834 yebT orf, hypothetical protein (VIMSS) 1.00 b0623 cspE cold shock protein E (NCBI) low > 76
Escherichia coli ECRC101 1.00 MCAODC_18960 yebT lipid-binding membrane homeostasis protein YebT 1.00 MCAODC_26635 cspE transcription antiterminator/RNA stability regulator CspE low > 87
Escherichia coli ECRC100 1.00 OKFHMN_26445 yebT lipid-binding membrane homeostasis protein YebT 1.00 OKFHMN_07420 cspE transcription antiterminator/RNA stability regulator CspE low > 80
Escherichia coli ECRC102 1.00 NIAGMN_01615 yebT lipid-binding membrane homeostasis protein YebT 1.00 NIAGMN_05475 cspE transcription antiterminator/RNA stability regulator CspE — —
Escherichia coli ECRC99 1.00 KEDOAH_01660 yebT lipid-binding membrane homeostasis protein YebT 1.00 KEDOAH_20550 cspE transcription antiterminator/RNA stability regulator CspE — —
Escherichia coli ECRC98 1.00 JDDGAC_01020 yebT lipid-binding membrane homeostasis protein YebT 1.00 JDDGAC_11065 cspE transcription antiterminator/RNA stability regulator CspE low > 86
Escherichia coli ECOR38 0.99 HEPCGN_04845 yebT lipid-binding membrane homeostasis protein YebT 1.00 HEPCGN_00855 cspE transcription antiterminator/RNA stability regulator CspE low > 87
Escherichia fergusonii Becca 0.99 EFB2_02167 Intermembrane transport protein YebT 1.00 EFB2_03468 Cold shock-like protein CspE low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS10210 lipid-binding membrane homeostasis protein YebT 1.00 ECOLIN_RS03400 transcription antiterminator/RNA stability regulator CspE low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2849 Paraquat-inducible protein B 0.99 GFF4536 Cold shock protein CspE — —
Enterobacter asburiae PDN3 0.87 EX28DRAFT_0722 Paraquat-inducible protein B 0.99 EX28DRAFT_2340 Cold shock proteins — —
Enterobacter sp. TBS_079 0.87 MPMX20_02741 Intermembrane transport protein YebT 0.99 MPMX20_01283 Cold shock-like protein CspE low > 85
Klebsiella michiganensis M5al 0.85 BWI76_RS17995 hypothetical protein 0.96 BWI76_RS07980 cold-shock protein — —
Pantoea sp. MT58 0.74 IAI47_08685 MCE family protein 0.97 IAI47_14075 transcription antiterminator/RNA stability regulator CspE low > 76
Serratia liquefaciens MT49 0.72 IAI46_10780 MCE family protein 0.95 IAI46_05870 transcription antiterminator/RNA stability regulator CspE low > 86
Pectobacterium carotovorum WPP14 0.72 HER17_RS11710 PqiB family protein 0.94 HER17_RS15290 transcription antiterminator/RNA stability regulator CspE low > 75
Rahnella sp. WP5 0.71 EX31_RS24860 PqiB family protein 0.96 EX31_RS23030 transcription antiterminator/RNA stability regulator CspE low > 89
Dickeya dianthicola ME23 0.68 DZA65_RS12525 MCE family protein 0.96 DZA65_RS06510 transcription antiterminator/RNA stability regulator CspE low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS12075 MCE family protein 0.96 HGI48_RS06165 transcription antiterminator/RNA stability regulator CspE — —
Dickeya dadantii 3937 0.67 DDA3937_RS11985 MCE family protein 0.96 DDA3937_RS06115 transcription antiterminator/RNA stability regulator CspE — —
Shewanella loihica PV-4 0.27 Shew_1796 hypothetical protein (RefSeq) 0.63 Shew_1165 cold-shock DNA-binding domain-containing protein (RefSeq) — —

Not shown: 4 genomes with orthologs for BNILDI_15750 only; 23 genomes with orthologs for BNILDI_21805 only