Conservation of cofitness between BNILDI_15690 and BNILDI_11730 in Escherichia coli ECRC62

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_15690 exoX exodeoxyribonuclease X 1.0 BNILDI_11730 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.86 10
Escherichia coli ECOR27 0.99 NOLOHH_16895 exoX exodeoxyribonuclease X 1.00 NOLOHH_12925 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 75
Escherichia coli BW25113 0.99 b1844 exoX exodeoxyribonuclease X (NCBI) 1.00 b2594 rluD 23S rRNA pseudouridine synthase (NCBI) — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS10265 exodeoxyribonuclease X 1.00 ECOLIN_RS14675 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia fergusonii Becca 0.99 EFB2_02100 Exodeoxyribonuclease 10 1.00 EFB2_01296 Ribosomal large subunit pseudouridine synthase D low > 86
Escherichia coli ECOR38 0.99 HEPCGN_04785 exoX exodeoxyribonuclease X 0.99 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 87
Escherichia coli BL21 0.99 ECD_01815 exodeoxyribonuclease 10; DNA exonuclease X 1.00 ECD_02484 23S rRNA pseudouridine(1911,1915,1917) synthase low > 61
Escherichia coli ECRC100 0.99 OKFHMN_26385 exoX exodeoxyribonuclease X 0.99 OKFHMN_21250 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 80
Escherichia coli ECRC98 0.99 JDDGAC_00960 exoX exodeoxyribonuclease X 0.99 JDDGAC_24915 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 86
Escherichia coli ECRC102 0.99 NIAGMN_01675 exoX exodeoxyribonuclease X 0.99 NIAGMN_19020 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01887 Exodeoxyribonuclease 10 1.00 OHPLBJKB_01112 Ribosomal large subunit pseudouridine synthase D low > 73
Escherichia coli ECRC99 0.99 KEDOAH_01720 exoX exodeoxyribonuclease X 0.99 KEDOAH_06970 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia coli ECRC101 0.98 MCAODC_19020 exoX exodeoxyribonuclease X 0.99 MCAODC_11780 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF1623 Exodeoxyribonuclease X (EC 3.1.11.-) 0.94 GFF4182 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_02751 Exodeoxyribonuclease 10 0.94 MPMX20_03463 Ribosomal large subunit pseudouridine synthase D low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0710 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 0.94 EX28DRAFT_2695 pseudouridine synthase, RluA family 0.56 39
Klebsiella michiganensis M5al 0.88 BWI76_RS18070 DNA polymerase III subunit epsilon 0.93 BWI76_RS21450 23S rRNA pseudouridine(1911/1915/1917) synthase low > 92
Rahnella sp. WP5 0.77 EX31_RS00350 exodeoxyribonuclease X 0.84 EX31_RS07570 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 89
Erwinia tracheiphila SCR3 0.63 LU632_RS13315 exoX exodeoxyribonuclease X 0.85 LU632_RS16945 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 74
Pantoea sp. MT58 0.62 IAI47_08520 exodeoxyribonuclease X 0.87 IAI47_04425 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 76
Serratia liquefaciens MT49 0.60 IAI46_09980 exodeoxyribonuclease X 0.88 IAI46_03985 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 86
Sphingomonas koreensis DSMZ 15582 0.19 Ga0059261_2458 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 0.35 Ga0059261_0664 pseudouridine synthase, RluA family low > 68
Bosea sp. OAE506 0.19 ABIE41_RS06580 exonuclease domain-containing protein 0.29 ABIE41_RS05635 RluA family pseudouridine synthase low > 77
Rhizobium sp. OAE497 0.17 ABIE40_RS30485 DNA polymerase III subunit epsilon 0.33 ABIE40_RS14790 RluA family pseudouridine synthase low > 107
Acinetobacter radioresistens SK82 0.16 MPMX26_02051 Exodeoxyribonuclease 10 0.44 MPMX26_00735 Ribosomal large subunit pseudouridine synthase D low > 36

Not shown: 0 genomes with orthologs for BNILDI_15690 only; 69 genomes with orthologs for BNILDI_11730 only