Conservation of cofitness between Atu3793 and Atu2743 in Agrobacterium fabrum C58
18 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Agrobacterium fabrum C58 | 1.0 | Atu3793 | | aspartate ammonia-lyase | 1.0 | Atu2743 | | hypothetical protein | 0.18 | 20 |
Azospirillum sp. SherDot2 | 0.62 | MPMX19_03594 | | Aspartate ammonia-lyase | 0.55 | MPMX19_05867 | | Sialic acid TRAP transporter large permease protein SiaM | low | > 112 |
Variovorax sp. SCN45 | 0.61 | GFF4594 | | Aspartate ammonia-lyase (EC 4.3.1.1) | 0.57 | GFF1516 | | TRAP-type C4-dicarboxylate transport system, large permease component | low | > 127 |
Variovorax sp. OAS795 | 0.61 | ABID97_RS05930 | | aspartate ammonia-lyase | 0.59 | ABID97_RS26070 | | TRAP transporter large permease subunit | — | — |
Dechlorosoma suillum PS | 0.59 | Dsui_3481 | | aspartate ammonia-lyase | 0.32 | Dsui_3153 | | TRAP transporter, DctM subunit | low | > 51 |
Pseudomonas sp. RS175 | 0.55 | PFR28_04498 | | Aspartate ammonia-lyase | 0.58 | PFR28_01613 | | Sialic acid TRAP transporter large permease protein SiaM | low | > 88 |
Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_4085 | | Aspartate ammonia-lyase (EC 4.3.1.1) | 0.57 | Pf6N2E2_1302 | | TRAP-type C4-dicarboxylate transport system, large permease component | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.54 | AO356_11090 | | aspartate ammonia-lyase | 0.58 | AO356_25640 | | L-dehydroascorbate transporter large permease subunit | low | > 104 |
Pseudomonas stutzeri RCH2 | 0.52 | Psest_4074 | | Aspartate ammonia-lyase | 0.52 | Psest_2124 | | D-gluconate TRAP transporter, large permease component (from data) | — | — |
Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS24045 | | aspartate ammonia-lyase | 0.53 | ECOLIN_RS20465 | | 2,3-diketo-L-gulonate TRAP transporter large permease YiaN | low | > 52 |
Escherichia coli ECOR27 | 0.50 | NOLOHH_04695 | aspA | aspartate ammonia-lyase | 0.52 | NOLOHH_07825 | yiaN | 2,3-diketo-L-gulonate transporter large permease YiaN | low | > 57 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_03904 | | Aspartate ammonia-lyase | 0.52 | OHPLBJKB_00126 | | Sialic acid TRAP transporter large permease protein SiaM | low | > 73 |
Escherichia coli BW25113 | 0.50 | b4139 | aspA | aspartate ammonia-lyase (aspartase) (VIMSS) | 0.52 | b3578 | yiaN | predicted transporter (NCBI) | low | > 76 |
Escherichia fergusonii Becca | 0.50 | EFB2_04396 | | Aspartate ammonia-lyase | 0.53 | EFB2_00228 | | Sialic acid TRAP transporter large permease protein SiaM | low | > 86 |
Escherichia coli ECRC62 | 0.50 | BNILDI_06795 | aspA | aspartate ammonia-lyase | 0.52 | BNILDI_03720 | yiaN | 2,3-diketo-L-gulonate transporter large permease YiaN | — | — |
Escherichia coli BL21 | 0.50 | ECD_04009 | | aspartate ammonia-lyase | 0.52 | ECD_03430 | | 2,3-diketo-L-gulonate TRAP transporter large permease protein | low | > 60 |
Escherichia coli ECOR38 | 0.50 | HEPCGN_10655 | aspA | aspartate ammonia-lyase | 0.52 | HEPCGN_14770 | yiaN | 2,3-diketo-L-gulonate transporter large permease YiaN | low | > 85 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF2013 | | Aspartate ammonia-lyase (EC 4.3.1.1) | 0.52 | GFF431 | | 2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN | low | > 78 |
Castellaniella sp019104865 MT123 | 0.48 | ABCV34_RS07730 | | aspartate ammonia-lyase | 0.58 | ABCV34_RS11535 | | TRAP transporter large permease subunit | low | > 48 |
Not shown: 39 genomes with orthologs for Atu3793 only; 8 genomes with orthologs for Atu2743 only