Conservation of cofitness between BT0252 and BT4331 in Bacteroides thetaiotaomicron VPI-5482

15 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT0252 transcription-repair coupling factor (NCBI ptt file) 1.0 BT4331 conserved hypothetical protein (NCBI ptt file) 0.47 4
Bacteroides ovatus ATCC 8483 0.95 BACOVA_00401 transcription-repair coupling factor 0.97 BACOVA_05134 hypothetical protein low > 94
Bacteroides stercoris CC31F 0.87 HMPREF1181_RS04640 transcription-repair coupling factor 0.87 HMPREF1181_RS05925 class I SAM-dependent rRNA methyltransferase low > 56
Phocaeicola vulgatus CL09T03C04 0.79 HMPREF1058_RS15450 transcription-repair coupling factor 0.84 HMPREF1058_RS05890 class I SAM-dependent rRNA methyltransferase low > 67
Phocaeicola dorei CL03T12C01 0.79 ABI39_RS11420 transcription-repair coupling factor 0.86 ABI39_RS18215 class I SAM-dependent rRNA methyltransferase low > 72
Parabacteroides merdae CL09T00C40 0.67 HMPREF1078_RS02110 transcription-repair coupling factor 0.76 HMPREF1078_RS13685 class I SAM-dependent rRNA methyltransferase low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS21080 transcription-repair coupling factor 0.31 ABZR88_RS22040 class I SAM-dependent rRNA methyltransferase low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_1312 transcription-repair coupling factor (mfd) 0.54 Echvi_3350 Predicted SAM-dependent methyltransferases low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.46 CA264_15820 transcription-repair coupling factor 0.57 CA264_05605 RlmI/RlmK family 23S rRNA methyltransferase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.46 CA265_RS21070 transcription-repair coupling factor 0.32 CA265_RS19815 RlmI/RlmK family 23S rRNA methyltransferase low > 88
Ralstonia solanacearum PSI07 0.25 RPSI07_RS16040 transcription-repair coupling factor 0.35 RPSI07_RS23695 class I SAM-dependent rRNA methyltransferase low > 81
Magnetospirillum magneticum AMB-1 0.25 AMB_RS12390 transcription-repair coupling factor 0.23 AMB_RS22065 class I SAM-dependent rRNA methyltransferase low > 64
Dechlorosoma suillum PS 0.24 Dsui_2385 transcription-repair coupling factor Mfd 0.32 Dsui_0653 putative SAM-dependent methyltransferase low > 51
Variovorax sp. OAS795 0.24 ABID97_RS17285 transcription-repair coupling factor 0.27 ABID97_RS06155 class I SAM-dependent methyltransferase low > 91
Phaeobacter inhibens DSM 17395 0.24 PGA1_c14920 transcription-repair-coupling factor Mfd 0.16 PGA1_c19990 ribosomal RNA large subunit methyltransferase I low > 62
Variovorax sp. SCN45 0.22 GFF412 Transcription-repair coupling factor 0.28 GFF4489 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) low > 127

Not shown: 5 genomes with orthologs for BT0252 only; 65 genomes with orthologs for BT4331 only