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  • Conservation of cofitness between SO2710 and SO0555 in Shewanella oneidensis MR-1

    7 genomes with putative orthologs of both genes

    Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
    Shewanella oneidensis MR-1 1.0 SO2710 conserved hypothetical protein (NCBI ptt file) 1.0 SO0555 conserved hypothetical protein (NCBI ptt file) 0.31 2
    Shewanella sp. ANA-3 0.88 Shewana3_2495 DoxX family protein (RefSeq) 0.95 Shewana3_0554 diguanylate cyclase/phosphodiesterase (RefSeq) low > 73
    Shewanella amazonensis SB2B 0.75 Sama_1456 hypothetical protein (RefSeq) 0.68 Sama_3153 putative diguanylate phosphodiesterase (RefSeq) low > 62
    Shewanella loihica PV-4 0.67 Shew_1739 DoxX family protein (RefSeq) 0.63 Shew_0436 diguanylate cyclase/phosphodiesterase (RefSeq) low > 60
    Pseudomonas aeruginosa PA14 0.59 IKLFDK_16800 DoxX 0.38 IKLFDK_16660 diguanylate phosphodiesterase low > 98
    Pseudomonas aeruginosa PUPa3 0.59 DQ20_RS40545 DoxX family protein 0.38 DQ20_RS40410 bifunctional diguanylate cyclase/phosphodiesterase low > 101
    Pseudomonas aeruginosa MRSN321 0.58 DY961_RS00485 DoxX family protein 0.38 DY961_RS00625 bifunctional diguanylate cyclase/phosphodiesterase low > 100
    Pseudomonas fluorescens FW300-N2E3 0.38 AO353_18105 AraC family transcriptional regulator 0.37 AO353_02445 diguanylate phosphodiesterase low > 101

    Not shown: 3 genomes with orthologs for SO2710 only; 36 genomes with orthologs for SO0555 only