Conservation of cofitness between b2810 and b3210 in Escherichia coli BW25113

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2810 csdA cysteine sulfinate desulfinase (NCBI) 1.0 b3210 arcB hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) 0.32 10
Escherichia coli BL21 1.00 ECD_02661 cysteine sulfinate desulfinase 1.00 ECD_03075 aerobic respiration control sensor histidine protein kinase, cognate to two-component response regulators ArcA and RssB low > 60
Escherichia coli ECRC62 1.00 BNILDI_10490 csdA cysteine desulfurase CsdA 1.00 BNILDI_01840 arcB aerobic respiration two-component sensor histidine kinase ArcB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00921 Cysteine desulfurase CsdA 1.00 OHPLBJKB_00490 Aerobic respiration control sensor protein ArcB 0.70 42
Escherichia coli ECOR38 0.99 HEPCGN_19360 csdA cysteine desulfurase CsdA 1.00 HEPCGN_16770 arcB aerobic respiration two-component sensor histidine kinase ArcB low > 85
Escherichia coli ECRC99 0.99 KEDOAH_08025 csdA cysteine desulfurase CsdA 1.00 KEDOAH_10255 arcB aerobic respiration two-component sensor histidine kinase ArcB — —
Escherichia coli ECRC102 0.99 NIAGMN_17875 csdA cysteine desulfurase CsdA 1.00 NIAGMN_15655 arcB aerobic respiration two-component sensor histidine kinase ArcB — —
Escherichia coli ECRC101 0.99 OKFHMN_20105 csdA cysteine desulfurase CsdA 1.00 OKFHMN_17895 arcB aerobic respiration two-component sensor histidine kinase ArcB — —
Escherichia coli ECRC101 0.99 MCAODC_10630 csdA cysteine desulfurase CsdA 1.00 MCAODC_08415 arcB aerobic respiration two-component sensor histidine kinase ArcB — —
Escherichia coli ECRC98 0.99 JDDGAC_23770 csdA cysteine desulfurase CsdA 1.00 JDDGAC_21520 arcB aerobic respiration two-component sensor histidine kinase ArcB — —
Escherichia coli ECOR27 0.99 NOLOHH_11985 csdA cysteine desulfurase CsdA 1.00 NOLOHH_09695 arcB aerobic respiration two-component sensor histidine kinase ArcB — —
Escherichia fergusonii Becca 0.98 EFB2_01107 Cysteine desulfurase CsdA 1.00 EFB2_00613 Aerobic respiration control sensor protein ArcB low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS15660 cysteine desulfurase CsdA 1.00 ECOLIN_RS18465 aerobic respiration two-component sensor histidine kinase ArcB low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF4867 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA 0.92 GFF2954 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) low > 78
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2886 cysteine desulfurase, catalytic subunit CsdA 0.89 EX28DRAFT_3264 PAS domain S-box low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_03673 Cysteine desulfurase CsdA 0.89 MPMX20_04115 Aerobic respiration control sensor protein ArcB 0.23 67
Klebsiella michiganensis M5al 0.82 BWI76_RS22965 cysteine sulfinate desulfinase 0.87 BWI76_RS25300 hybrid sensor histidine kinase/response regulator low > 92
Pantoea sp. MT58 0.73 IAI47_04015 cysteine desulfurase CsdA 0.75 IAI47_17215 aerobic respiration two-component sensor histidine kinase ArcB low > 76
Serratia liquefaciens MT49 0.71 IAI46_20350 cysteine desulfurase CsdA 0.76 IAI46_22335 aerobic respiration two-component sensor histidine kinase ArcB low > 86
Pectobacterium carotovorum WPP14 0.70 HER17_RS16425 cysteine desulfurase CsdA 0.75 HER17_RS19900 aerobic respiration two-component sensor histidine kinase ArcB low > 75
Erwinia tracheiphila SCR3 0.69 LU632_RS06240 csdA cysteine desulfurase CsdA 0.75 LU632_RS21310 arcB aerobic respiration two-component sensor histidine kinase ArcB — —
Rahnella sp. WP5 0.67 EX31_RS13120 cysteine desulfurase CsdA 0.75 EX31_RS12520 aerobic respiration two-component sensor histidine kinase ArcB low > 89
Dickeya dianthicola 67-19 0.66 HGI48_RS05045 cysteine desulfurase CsdA 0.73 HGI48_RS01570 aerobic respiration two-component sensor histidine kinase ArcB low > 71
Dickeya dianthicola ME23 0.65 DZA65_RS05385 cysteine desulfurase CsdA 0.73 DZA65_RS01645 aerobic respiration two-component sensor histidine kinase ArcB low > 75
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_11740 cysteine desulfurase CsdA 0.56 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB 0.61 38

Not shown: 13 genomes with orthologs for b2810 only; 1 genomes with orthologs for b3210 only