Conservation of cofitness between b2810 and b1831 in Escherichia coli BW25113

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2810 csdA cysteine sulfinate desulfinase (NCBI) 1.0 b1831 proQ putative solute/DNA competence effector (NCBI) 0.30 15
Escherichia coli BL21 1.00 ECD_02661 cysteine sulfinate desulfinase 1.00 ECD_01802 RNA chaperone, putative ProP translation regulator low > 60
Escherichia coli ECRC62 1.00 BNILDI_10490 csdA cysteine desulfurase CsdA 1.00 BNILDI_15765 proQ RNA chaperone ProQ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00921 Cysteine desulfurase CsdA 1.00 OHPLBJKB_01900 RNA chaperone ProQ 0.78 11
Escherichia coli ECOR38 0.99 HEPCGN_19360 csdA cysteine desulfurase CsdA 0.99 HEPCGN_04860 proQ RNA chaperone ProQ low > 85
Escherichia coli ECRC98 0.99 JDDGAC_23770 csdA cysteine desulfurase CsdA 0.99 JDDGAC_01035 proQ RNA chaperone ProQ — —
Escherichia coli ECRC101 0.99 OKFHMN_20105 csdA cysteine desulfurase CsdA 0.99 OKFHMN_26460 proQ RNA chaperone ProQ — —
Escherichia coli ECRC99 0.99 KEDOAH_08025 csdA cysteine desulfurase CsdA 0.99 KEDOAH_01645 proQ RNA chaperone ProQ — —
Escherichia coli ECRC101 0.99 MCAODC_10630 csdA cysteine desulfurase CsdA 0.99 MCAODC_18945 proQ RNA chaperone ProQ — —
Escherichia coli ECRC102 0.99 NIAGMN_17875 csdA cysteine desulfurase CsdA 0.99 NIAGMN_01600 proQ RNA chaperone ProQ — —
Escherichia coli ECOR27 0.99 NOLOHH_11985 csdA cysteine desulfurase CsdA 1.00 NOLOHH_16970 proQ RNA chaperone ProQ low > 57
Escherichia fergusonii Becca 0.98 EFB2_01107 Cysteine desulfurase CsdA 0.99 EFB2_02170 RNA chaperone ProQ low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS15660 cysteine desulfurase CsdA 0.99 ECOLIN_RS10195 RNA chaperone ProQ low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF4867 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA 0.84 GFF2846 ProQ: influences osmotic activation of compatible solute ProP low > 78
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2886 cysteine desulfurase, catalytic subunit CsdA 0.83 EX28DRAFT_0725 Activator of osmoprotectant transporter ProP low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_03673 Cysteine desulfurase CsdA 0.84 MPMX20_02738 RNA chaperone ProQ low > 85
Klebsiella michiganensis M5al 0.82 BWI76_RS22965 cysteine sulfinate desulfinase 0.77 BWI76_RS17980 RNA chaperone ProQ low > 92
Pantoea sp. MT58 0.73 IAI47_04015 cysteine desulfurase CsdA 0.68 IAI47_08700 RNA chaperone ProQ low > 76
Serratia liquefaciens MT49 0.71 IAI46_20350 cysteine desulfurase CsdA 0.70 IAI46_10795 RNA chaperone ProQ 0.35 79
Pectobacterium carotovorum WPP14 0.70 HER17_RS16425 cysteine desulfurase CsdA 0.61 HER17_RS11695 RNA chaperone ProQ low > 75
Erwinia tracheiphila SCR3 0.69 LU632_RS06240 csdA cysteine desulfurase CsdA 0.65 LU632_RS13255 proQ RNA chaperone ProQ low > 74
Rahnella sp. WP5 0.67 EX31_RS13120 cysteine desulfurase CsdA 0.66 EX31_RS24875 RNA chaperone ProQ 0.24 70
Dickeya dadantii 3937 0.66 DDA3937_RS05040 cysteine desulfurase CsdA 0.66 DDA3937_RS11970 RNA chaperone ProQ 0.52 52
Dickeya dianthicola 67-19 0.66 HGI48_RS05045 cysteine desulfurase CsdA 0.66 HGI48_RS12060 RNA chaperone ProQ low > 71
Dickeya dianthicola ME23 0.65 DZA65_RS05385 cysteine desulfurase CsdA 0.66 DZA65_RS12510 RNA chaperone ProQ — —
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_11740 cysteine desulfurase CsdA 0.48 CSW01_07520 RNA chaperone ProQ low > 62

Not shown: 12 genomes with orthologs for b2810 only; 5 genomes with orthologs for b1831 only