Conservation of cofitness between b1768 and b0859 in Escherichia coli BW25113

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1768 ydjB orf, hypothetical protein (VIMSS) 1.0 b0859 rumB 23S rRNA m(5)U747-methyltransferase (NCBI) 0.20 10
Escherichia coli BL21 1.00 ECD_01737 nicotinamidase/pyrazinamidase 0.98 ECD_00864 23S rRNA m(5)U747 methyltransferase, SAM-dependent low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01964 Nicotinamidase 0.98 OHPLBJKB_02809 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 73
Escherichia coli ECRC100 1.00 OKFHMN_26800 pncA bifunctional nicotinamidase/pyrazinamidase 0.98 OKFHMN_05935 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 80
Escherichia coli ECRC102 1.00 NIAGMN_01265 pncA bifunctional nicotinamidase/pyrazinamidase 0.98 NIAGMN_03980 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
Escherichia coli ECRC99 1.00 KEDOAH_01310 pncA bifunctional nicotinamidase/pyrazinamidase 0.98 KEDOAH_21975 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
Escherichia coli ECRC101 0.99 MCAODC_18610 pncA bifunctional nicotinamidase/pyrazinamidase 0.98 MCAODC_25150 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 87
Escherichia coli ECRC98 0.99 JDDGAC_01375 pncA bifunctional nicotinamidase/pyrazinamidase 0.98 JDDGAC_09570 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 86
Escherichia coli ECOR38 0.99 HEPCGN_05175 pncA bifunctional nicotinamidase/pyrazinamidase 0.98 HEPCGN_02095 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 87
Escherichia coli ECOR27 0.99 NOLOHH_17315 pncA bifunctional nicotinamidase/pyrazinamidase 0.99 NOLOHH_22305 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 75
Escherichia coli ECRC62 0.98 BNILDI_16100 pncA bifunctional nicotinamidase/pyrazinamidase 0.99 BNILDI_20560 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 75
Escherichia coli Nissle 1917 0.97 ECOLIN_RS09865 bifunctional nicotinamidase/pyrazinamidase 0.98 ECOLIN_RS04575 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
Escherichia fergusonii Becca 0.97 EFB2_02226 Nicotinamidase 0.98 EFB2_03202 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 86
Enterobacter asburiae PDN3 0.85 EX28DRAFT_1769 Amidases related to nicotinamidase 0.87 EX28DRAFT_2094 23S rRNA (uracil-5-)-methyltransferase RumB low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_01848 Nicotinamidase 0.87 MPMX20_01500 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 85
Klebsiella michiganensis M5al 0.84 BWI76_RS11575 nicotinamidase/pyrazinamidase 0.81 BWI76_RS09485 23S rRNA (uracil(747)-C(5))-methyltransferase 0.17 22
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF3481 Nicotinamidase (EC 3.5.1.19) 0.88 GFF763 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) low > 78
Serratia liquefaciens MT49 0.62 IAI46_14335 bifunctional nicotinamidase/pyrazinamidase 0.77 IAI46_08395 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 86
Rahnella sp. WP5 0.58 EX31_RS06295 bifunctional nicotinamidase/pyrazinamidase 0.76 EX31_RS09605 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 89
Dickeya dadantii 3937 0.58 DDA3937_RS10280 bifunctional nicotinamidase/pyrazinamidase 0.71 DDA3937_RS09485 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 74
Dickeya dianthicola 67-19 0.57 HGI48_RS10290 bifunctional nicotinamidase/pyrazinamidase 0.71 HGI48_RS09505 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 71
Dickeya dianthicola ME23 0.57 DZA65_RS10765 bifunctional nicotinamidase/pyrazinamidase 0.70 DZA65_RS09815 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 75
Pantoea sp. MT58 0.56 IAI47_08960 bifunctional nicotinamidase/pyrazinamidase 0.74 IAI47_13020 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 76
Erwinia tracheiphila SCR3 0.56 LU632_RS12980 pncA bifunctional nicotinamidase/pyrazinamidase 0.66 LU632_RS09660 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 74
Pectobacterium carotovorum WPP14 0.56 HER17_RS11115 bifunctional nicotinamidase/pyrazinamidase 0.72 HER17_RS12475 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 75
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_17740 nicotinamidase/pyrazinamidase 0.54 CSW01_18780 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 62

Not shown: 33 genomes with orthologs for b1768 only; 4 genomes with orthologs for b0859 only