Homologs of IAI47_03485 from Pantoea sp. MT58

helix-turn-helix domain-containing protein
SEED: Right origin-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pantoea sp. MT58 IAI47_03485 helix-turn-helix domain-containing protein insig. 100 100
  Rahnella sp. WP5 EX31_RS03965 MDR efflux pump AcrAB transcriptional activator RobA insig. 35 89
  Serratia liquefaciens MT49 IAI46_03005 MDR efflux pump AcrAB transcriptional activator RobA insig. 35 89
  Enterobacter asburiae PDN3 EX28DRAFT_3606 AraC-type DNA-binding domain-containing proteins insig. 34 89
  Enterobacter sp. TBS_079 MPMX20_00703 Right origin-binding protein sig. 34 89
  Klebsiella michiganensis M5al BWI76_RS04205 right oriC-binding transcriptional activator sig. 33 89
  Pectobacterium carotovorum WPP14 HER17_RS02770 MDR efflux pump AcrAB transcriptional activator RobA insig. 34 89
  Dickeya dadantii 3937 DDA3937_RS18435 MDR efflux pump AcrAB transcriptional activator RobA insig. 34 89
  Serratia liquefaciens MT49 IAI46_21365 helix-turn-helix domain-containing protein insig. 33 92
  Dickeya dianthicola 67-19 HGI48_RS18365 MDR efflux pump AcrAB transcriptional activator RobA cofit 33 89
  Dickeya dianthicola ME23 DZA65_RS19505 MDR efflux pump AcrAB transcriptional activator RobA sig. 33 89
  Escherichia coli BL21 ECD_04272 right oriC-binding transcriptional activator, AraC family insig. 33 89
  Escherichia coli ECOR27 NOLOHH_03480 robA MDR efflux pump AcrAB transcriptional activator RobA cofit 33 89
  Escherichia coli ECOR38 HEPCGN_09155 robA MDR efflux pump AcrAB transcriptional activator RobA insig. 33 89
  Escherichia coli ECRC100 OKFHMN_11150 robA MDR efflux pump AcrAB transcriptional activator RobA cofit 33 89
  Escherichia coli ECRC101 MCAODC_01665 robA MDR efflux pump AcrAB transcriptional activator RobA insig. 33 89
  Escherichia coli ECRC102 NIAGMN_09000 robA MDR efflux pump AcrAB transcriptional activator RobA insig. 33 89
  Escherichia coli ECRC62 BNILDI_08120 robA MDR efflux pump AcrAB transcriptional activator RobA cofit 33 89
  Escherichia coli ECRC98 JDDGAC_14745 robA MDR efflux pump AcrAB transcriptional activator RobA cofit 33 89
  Escherichia coli ECRC99 KEDOAH_17005 robA MDR efflux pump AcrAB transcriptional activator RobA no data 33 89
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03665 Right origin-binding protein insig. 33 89
  Escherichia coli Nissle 1917 ECOLIN_RS25230 MDR efflux pump AcrAB transcriptional activator RobA insig. 33 89
  Escherichia coli BW25113 b4396 rob DNA-binding transcriptional activator (NCBI) strong 33 89
  Escherichia fergusonii Becca EFB2_04048 Right origin-binding protein insig. 33 89
  Pantoea sp. MT58 IAI47_16240 MDR efflux pump AcrAB transcriptional activator RobA sig. 34 89
  Erwinia tracheiphila SCR3 LU632_RS02595 robA MDR efflux pump AcrAB transcriptional activator RobA sig. 33 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1064 Right origin-binding protein insig. 31 89
  Escherichia coli BL21 ECD_00257 putative DNA-binding transcriptional regulator strong 30 91
  Escherichia coli ECRC102 NIAGMN_07195 glxA AraC family transcriptional regulator insig. 29 97
  Escherichia coli ECRC100 OKFHMN_09130 glxA AraC family transcriptional regulator insig. 29 97
  Escherichia coli ECRC101 MCAODC_28355 glxA AraC family transcriptional regulator insig. 29 97
  Escherichia coli ECRC98 JDDGAC_12780 glxA AraC family transcriptional regulator cofit 29 97
  Escherichia coli ECRC99 KEDOAH_18835 glxA AraC family transcriptional regulator no data 29 97
  Escherichia fergusonii Becca EFB2_03739 Right origin-binding protein insig. 28 97
  Dickeya dianthicola 67-19 HGI48_RS08140 helix-turn-helix domain-containing protein cofit 33 91
  Escherichia coli ECRC62 BNILDI_00070 glxA AraC family transcriptional regulator cofit 29 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03381 Right origin-binding protein insig. 29 97
  Escherichia coli ECOR27 NOLOHH_01945 glxA AraC family transcriptional regulator insig. 29 97
  Escherichia coli Nissle 1917 ECOLIN_RS01970 helix-turn-helix domain-containing protein no data 28 97
  Dickeya dianthicola ME23 DZA65_RS08735 helix-turn-helix domain-containing protein insig. 32 91
  Rahnella sp. WP5 EX31_RS01820 helix-turn-helix domain-containing protein insig. 32 85
  Escherichia coli ECOR38 HEPCGN_07655 glxA AraC family transcriptional regulator cofit 28 97
  Dickeya dadantii 3937 DDA3937_RS07320 helix-turn-helix domain-containing protein insig. 54 34
  Serratia liquefaciens MT49 IAI46_11475 helix-turn-helix domain-containing protein insig. 50 38
  Serratia liquefaciens MT49 IAI46_07760 helix-turn-helix domain-containing protein insig. 49 38
  Serratia liquefaciens MT49 IAI46_02595 helix-turn-helix domain-containing protein insig. 33 91
  Pantoea sp. MT58 IAI47_17770 superoxide response transcriptional regulator SoxS insig. 43 44
  Serratia liquefaciens MT49 IAI46_18640 helix-turn-helix domain-containing protein insig. 52 34
  Escherichia coli ECOR38 HEPCGN_10855 araC AraC-type DNA-binding domain and AraC-containing proteins strong 51 34
  Escherichia coli ECRC62 BNILDI_09390 araC AraC-type DNA-binding domain and AraC-containing proteins cofit 51 34
  Erwinia tracheiphila SCR3 LU632_RS23250 soxS superoxide response transcriptional regulator SoxS insig. 50 34
  Pantoea sp. MT58 IAI47_17600 helix-turn-helix domain-containing protein insig. 44 36
  Escherichia coli BL21 ECD_03934 superoxide response regulon transcriptional activator; autoregulator strong 49 35
  Escherichia fergusonii Becca EFB2_04529 Regulatory protein SoxS insig. 49 35
  Escherichia coli ECOR27 NOLOHH_05125 soxS_A12S regulatory protein SoxS insig. 49 35
  Escherichia coli ECOR38 HEPCGN_11490 soxS_A12S regulatory protein SoxS insig. 49 35
  Escherichia coli ECRC100 OKFHMN_12875 soxS_A12S regulatory protein SoxS cofit 49 35
  Escherichia coli ECRC101 MCAODC_03385 soxS_A12S regulatory protein SoxS insig. 49 35
  Escherichia coli ECRC102 NIAGMN_10720 soxS_A12S regulatory protein SoxS insig. 49 35
  Escherichia coli ECRC62 BNILDI_06400 soxS_A12S regulatory protein SoxS cofit 49 35
  Escherichia coli ECRC98 JDDGAC_16510 soxS_A12S regulatory protein SoxS cofit 49 35
  Escherichia coli ECRC99 KEDOAH_15275 soxS_A12S regulatory protein SoxS no data 49 35
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03979 Regulatory protein SoxS insig. 49 35
  Escherichia coli Nissle 1917 ECOLIN_RS23505 superoxide response transcriptional regulator SoxS no data 49 35
  Escherichia coli BW25113 b4062 soxS DNA-binding transcriptional dual regulator (NCBI) strong 49 35
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1441 Regulatory protein SoxS insig. 49 34
  Pectobacterium carotovorum WPP14 HER17_RS07425 helix-turn-helix domain-containing protein insig. 44 37
  Klebsiella michiganensis M5al BWI76_RS01995 AraC family transcriptional regulator insig. 50 34
  Enterobacter asburiae PDN3 EX28DRAFT_4242 AraC-type DNA-binding domain-containing proteins insig. 49 34
  Enterobacter sp. TBS_079 MPMX20_00281 Regulatory protein SoxS strong 49 34
  Erwinia tracheiphila SCR3 LU632_RS00855 helix-turn-helix domain-containing protein insig. 47 36
  Klebsiella michiganensis M5al BWI76_RS07475 DNA-binding transcriptional regulator RamA strong 44 37
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4485 Transcriptional activator RamA insig. 44 37
  Enterobacter asburiae PDN3 EX28DRAFT_2422 Helix-turn-helix domain insig. 43 38
  Serratia liquefaciens MT49 IAI46_09935 helix-turn-helix domain-containing protein insig. 41 38
  Enterobacter sp. TBS_079 MPMX20_01137 Multiple antibiotic resistance protein MarA insig. 43 37
  Pantoea sp. MT58 IAI47_10300 helix-turn-helix domain-containing protein insig. 41 38
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2506 Multiple antibiotic resistance protein MarA insig. 38 38
  Enterobacter asburiae PDN3 EX28DRAFT_1206 Helix-turn-helix domain insig. 41 34
  Enterobacter sp. TBS_079 MPMX20_02259 Multiple antibiotic resistance protein MarA insig. 41 34
  Klebsiella michiganensis M5al BWI76_RS12945 AraC family transcriptional regulator no data 43 34
  Rahnella sp. WP5 EX31_RS01485 helix-turn-helix domain-containing protein insig. 42 34
  Klebsiella michiganensis M5al BWI76_RS15295 MDR efflux pump AcrAB transcriptional activator MarA strong 40 36
  Enterobacter sp. TBS_079 MPMX20_01153 HTH-type transcriptional activator RhaS sig. 40 36
  Escherichia coli BL21 ECD_01490 multiple antibiotic resistance transcriptional regulator no data 40 34
  Escherichia coli ECOR27 NOLOHH_18720 marA MDR efflux pump AcrAB transcriptional activator MarA cofit 40 34
  Escherichia coli ECOR38 HEPCGN_26845 marA MDR efflux pump AcrAB transcriptional activator MarA insig. 40 34
  Escherichia coli ECRC100 OKFHMN_01075 marA MDR efflux pump AcrAB transcriptional activator MarA no data 40 34
  Escherichia coli ECRC101 MCAODC_16850 marA MDR efflux pump AcrAB transcriptional activator MarA insig. 40 34
  Escherichia coli ECRC102 NIAGMN_25220 marA MDR efflux pump AcrAB transcriptional activator MarA no data 40 34
  Escherichia coli ECRC62 BNILDI_17210 marA MDR efflux pump AcrAB transcriptional activator MarA cofit 40 34
  Escherichia coli ECRC98 JDDGAC_03585 marA MDR efflux pump AcrAB transcriptional activator MarA no data 40 34
  Escherichia coli ECRC99 KEDOAH_27355 marA MDR efflux pump AcrAB transcriptional activator MarA no data 40 34
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02188 Multiple antibiotic resistance protein MarA insig. 40 34
  Escherichia coli BW25113 b1531 marA multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) strong 40 34
  Escherichia fergusonii Becca EFB2_02430 Multiple antibiotic resistance protein MarA insig. 40 34
  Escherichia coli Nissle 1917 ECOLIN_RS08735 MDR efflux pump AcrAB transcriptional activator MarA insig. 40 34
  Rahnella sp. WP5 EX31_RS19240 helix-turn-helix domain-containing protein no data 42 38
  Enterobacter asburiae PDN3 EX28DRAFT_1474 AraC-type DNA-binding domain-containing proteins insig. 41 34
  Klebsiella michiganensis M5al BWI76_RS10310 DNA-binding transcriptional regulator RamA sig. 41 36