Homologs of HMPREF1058_RS13435 from Phocaeicola vulgatus CL09T03C04

helix-turn-helix domain-containing protein
SEED: DNA-binding response regulator, AraC family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13435 helix-turn-helix domain-containing protein insig. 100 100
o Phocaeicola dorei CL03T12C01 ABI39_RS08945 helix-turn-helix domain-containing protein insig. 95 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08385 helix-turn-helix domain-containing protein insig. 33 99
  Phocaeicola dorei CL03T12C01 ABI39_RS02565 helix-turn-helix domain-containing protein insig. 32 99
  Bacteroides thetaiotaomicron VPI-5482 BT0267 two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) sig. 28 84
  Phocaeicola dorei CL03T12C01 ABI39_RS05725 response regulator insig. 28 81
  Bacteroides ovatus ATCC 8483 BACOVA_01894 transcriptional regulator, AraC family strong 25 96
  Phocaeicola dorei CL03T12C01 ABI39_RS04050 helix-turn-helix domain-containing protein insig. 23 100
  Phocaeicola dorei CL03T12C01 ABI39_RS03030 response regulator insig. 24 80
  Bacteroides thetaiotaomicron VPI-5482 BT3678 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) insig. 24 80
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08910 response regulator insig. 24 80
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS17305 hybrid sensor histidine kinase/response regulator transcription factor cofit 23 87
  Phocaeicola dorei CL03T12C01 ABI39_RS00425 helix-turn-helix domain-containing protein insig. 25 61
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14215 hypothetical protein insig. 24 84
  Bacteroides thetaiotaomicron VPI-5482 BT2897 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) insig. 24 83
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2760 Signal transduction histidine kinase insig. 22 84
  Bacteroides thetaiotaomicron VPI-5482 BT2860 two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) insig. 22 82
  Phocaeicola dorei CL03T12C01 ABI39_RS00165 response regulator strong 24 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00710 hypothetical protein insig. 23 80
  Phocaeicola dorei CL03T12C01 ABI39_RS03465 response regulator sig. 23 86
  Bacteroides ovatus ATCC 8483 BACOVA_03489 transcriptional regulator, AraC family insig. 24 52
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15155 hybrid sensor histidine kinase/response regulator transcription factor cofit 23 81
  Bacteroides ovatus ATCC 8483 BACOVA_02182 response regulator receiver domain protein insig. 22 88
  Bacteroides ovatus ATCC 8483 BACOVA_02857 conserved hypothetical protein TIGR03982 insig. 21 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11185 response regulator insig. 24 84
  Bacteroides thetaiotaomicron VPI-5482 BT3660 transcriptional regulator (NCBI ptt file) insig. 23 60
  Phocaeicola dorei CL03T12C01 ABI39_RS10925 response regulator insig. 23 81
  Phocaeicola dorei CL03T12C01 ABI39_RS05860 response regulator insig. 23 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06050 hypothetical protein insig. 23 79
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15170 response regulator insig. 23 81
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05785 hypothetical protein insig. 22 83
  Bacteroides ovatus ATCC 8483 BACOVA_04394 response regulator receiver domain protein strong 21 83
  Bacteroides stercoris CC31F HMPREF1181_RS06690 response regulator sig. 22 87
  Bacteroides thetaiotaomicron VPI-5482 BT4663 two-component system sensor histidine kinase/response (NCBI ptt file) strong 22 87
  Bacteroides ovatus ATCC 8483 BACOVA_05614 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein insig. 54 12
  Bacteroides stercoris CC31F HMPREF1181_RS08430 response regulator insig. 22 83
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4346 Signal transduction histidine kinase insig. 22 83
  Bacteroides ovatus ATCC 8483 BACOVA_01301 hypothetical protein insig. 22 99
  Phocaeicola dorei CL03T12C01 ABI39_RS11905 helix-turn-helix domain-containing protein insig. 22 95
  Bacteroides stercoris CC31F HMPREF1181_RS08545 response regulator insig. 21 83
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12625 hybrid sensor histidine kinase/response regulator transcription factor insig. 21 83
  Phocaeicola dorei CL03T12C01 ABI39_RS09010 response regulator insig. 21 81
  Bacteroides ovatus ATCC 8483 BACOVA_02800 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein insig. 22 84
  Bacteroides ovatus ATCC 8483 BACOVA_05479 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein insig. 21 86
  Bacteroides thetaiotaomicron VPI-5482 BT0138 transcriptional regulator (NCBI ptt file) insig. 23 97
  Bacteroides ovatus ATCC 8483 BACOVA_03582 response regulator receiver domain protein insig. 21 78
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13485 response regulator insig. 21 81
  Alteromonas macleodii MIT1002 MIT1002_02557 Sensor kinase protein RcsC cofit 22 86
  Bacteroides ovatus ATCC 8483 BACOVA_03562 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein insig. 45 15
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08780 hybrid sensor histidine kinase/response regulator transcription factor insig. 24 86
  Bacteroides stercoris CC31F HMPREF1181_RS08895 response regulator insig. 23 81
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08375 two-component regulator propeller domain-containing protein insig. 23 83
  Bacteroides ovatus ATCC 8483 BACOVA_01840 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein insig. 22 83
  Bacteroides stercoris CC31F HMPREF1181_RS08430 response regulator insig. 48 13
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09900 two-component regulator propeller domain-containing protein insig. 21 80
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08180 helix-turn-helix domain-containing protein insig. 20 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14910 helix-turn-helix domain-containing protein insig. 22 85
  Bacteroides thetaiotaomicron VPI-5482 BT4663 two-component system sensor histidine kinase/response (NCBI ptt file) strong 46 13
  Bacteroides ovatus ATCC 8483 BACOVA_01996 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein strong 22 84
  Bacteroides ovatus ATCC 8483 BACOVA_05479 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein insig. 42 16
  Bacteroides ovatus ATCC 8483 BACOVA_01673 response regulator receiver domain protein insig. 22 90
  Bacteroides ovatus ATCC 8483 BACOVA_02648 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein cofit 47 13
  Bacteroides thetaiotaomicron VPI-5482 BT3097 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) insig. 20 84
  Bacteroides ovatus ATCC 8483 BACOVA_03437 response regulator receiver domain protein sig. 23 78
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15945 helix-turn-helix domain-containing protein insig. 25 42
  Bacteroides stercoris CC31F HMPREF1181_RS02335 response regulator strong 23 84
  Bacteroides ovatus ATCC 8483 BACOVA_00239 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein insig. 22 81
  Bacteroides ovatus ATCC 8483 BACOVA_03441 response regulator receiver domain protein insig. 22 81
  Bacteroides thetaiotaomicron VPI-5482 BT4178 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) insig. 23 79
  Bacteroides stercoris CC31F HMPREF1181_RS08545 response regulator insig. 50 11
  Bacteroides thetaiotaomicron VPI-5482 BT3334 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) strong 21 84
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11130 two-component regulator propeller domain-containing protein cofit 21 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02180 two-component regulator propeller domain-containing protein insig. 22 85
  Bacteroides ovatus ATCC 8483 BACOVA_01311 transcriptional regulator, AraC family insig. 21 95
  Bacteroides ovatus ATCC 8483 BACOVA_04977 response regulator receiver domain protein cofit 22 79
  Kangiella aquimarina DSM 16071 B158DRAFT_0509 diguanylate cyclase (GGDEF) domain strong 21 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3754 Signal transduction histidine kinase insig. 22 80
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13495 hybrid sensor histidine kinase/response regulator transcription factor insig. 21 75
  Phocaeicola dorei CL03T12C01 ABI39_RS10630 helix-turn-helix domain-containing protein insig. 22 81
  Bacteroides stercoris CC31F HMPREF1181_RS06690 response regulator sig. 41 13
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14910 helix-turn-helix domain-containing protein insig. 37 14
  Phocaeicola dorei CL03T12C01 ABI39_RS10630 helix-turn-helix domain-containing protein insig. 43 12
  Bacteroides ovatus ATCC 8483 BACOVA_00976 response regulator receiver domain protein insig. 23 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3754 Signal transduction histidine kinase insig. 46 11
  Phocaeicola dorei CL03T12C01 ABI39_RS00665 helix-turn-helix domain-containing protein insig. 20 100
  Bacteroides thetaiotaomicron VPI-5482 BT3465 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) insig. 23 40
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05430 hybrid sensor histidine kinase/response regulator transcription factor insig. 21 90
  Phocaeicola dorei CL03T12C01 ABI39_RS09170 response regulator cofit 34 16
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06780 hybrid sensor histidine kinase/response regulator insig. 24 45
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15110 response regulator insig. 21 85
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12170 response regulator insig. 43 13
  Bacteroides ovatus ATCC 8483 BACOVA_03607 putative flagellar protein FliS insig. 42 13
  Bacteroides stercoris CC31F HMPREF1181_RS05670 substrate-binding domain-containing protein strong 44 12
  Bacteroides ovatus ATCC 8483 BACOVA_03441 response regulator receiver domain protein insig. 43 12
  Bacteroides thetaiotaomicron VPI-5482 BT2923 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) insig. 25 35
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07305 hybrid sensor histidine kinase/response regulator transcription factor insig. 21 86
  Phocaeicola dorei CL03T12C01 ABI39_RS10705 response regulator insig. 21 80
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11200 hybrid sensor histidine kinase/response regulator transcription factor insig. 39 12
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 21 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13580 response regulator strong 23 72