| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_012035 | | ABC transporter substrate-binding protein | 1.0 | TX73_019715 | | high-affinity branched-chain amino acid ABC transporter permease LivM | 0.38 | 20 |
| Azospirillum brasilense Sp245 | 0.61 | AZOBR_RS23015 | | peptide ABC transporter substrate-binding protein | 0.51 | AZOBR_RS08240 | | L-proline and D-alanine ABC transporter, permease component 2 (from data) | low | > 97 |
| Agrobacterium fabrum C58 | 0.35 | Atu3433 | | oligopeptide ABC transporter substrate-binding protein | 0.50 | Atu2426 | | ABC transporter, membrane spanning protein (branched chain amino acid) | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.31 | SMa2075 | | ABC transporter substrate-binding protein | 0.52 | SMc01950 | | high-affinity branched-chain amino acid ABC transporter permease | low | > 103 |
| Rhizobium sp. OAE497 | 0.16 | ABIE40_RS24180 | | ABC transporter substrate-binding protein | 0.53 | ABIE40_RS14710 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 107 |
| Klebsiella michiganensis M5al | 0.16 | BWI76_RS19180 | | diguanylate cyclase | 0.39 | BWI76_RS26340 | | branched-chain amino acid ABC transporter permease | low | > 92 |
| Escherichia coli ECRC102 | 0.16 | NIAGMN_25450 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.38 | NIAGMN_14520 | livM | branched chain amino acid ABC transporter permease LivM | — | — |
| Escherichia coli ECRC98 | 0.16 | JDDGAC_03810 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.38 | JDDGAC_20380 | livM | branched chain amino acid ABC transporter permease LivM | low | > 86 |
| Escherichia coli ECRC99 | 0.16 | KEDOAH_27125 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.38 | KEDOAH_11390 | livM | branched chain amino acid ABC transporter permease LivM | — | — |
| Escherichia coli ECRC62 | 0.16 | BNILDI_17445 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.38 | BNILDI_02960 | livM | branched chain amino acid ABC transporter permease LivM | low | > 75 |
| Escherichia coli ECRC100 | 0.16 | OKFHMN_01320 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.38 | OKFHMN_16750 | livM | branched chain amino acid ABC transporter permease LivM | low | > 80 |
| Escherichia coli ECOR38 | 0.16 | HEPCGN_26475 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.38 | HEPCGN_15570 | livM | branched chain amino acid ABC transporter permease LivM | low | > 87 |
| Escherichia coli ECRC101 | 0.16 | MCAODC_16620 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.38 | MCAODC_07280 | livM | branched chain amino acid ABC transporter permease LivM | low | > 87 |
| Escherichia coli BW25113 | 0.16 | b1487 | ddpA | D-ala-D-a la transporter subunit (NCBI) | 0.38 | b3456 | livM | leucine/isoleucine/valine transporter subunit (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.16 | OHPLBJKB_02230 | | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.38 | OHPLBJKB_00247 | | hypothetical protein | low | > 73 |
| Escherichia coli BL21 | 0.16 | ECD_01445 | | D,D-dipeptide ABC transporter periplasmic binding protein | 0.38 | ECD_03305 | | branched-chain amino acid ABC transporter permease | low | > 61 |
| Escherichia coli ECOR27 | 0.15 | NOLOHH_18960 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.38 | NOLOHH_08545 | livM | branched chain amino acid ABC transporter permease LivM | low | > 75 |
| Enterobacter sp. TBS_079 | 0.15 | MPMX20_02356 | | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.39 | MPMX20_04332 | | hypothetical protein | low | > 85 |
| Variovorax sp. OAS795 | 0.15 | ABID97_RS11660 | | ABC transporter substrate-binding protein | 0.45 | ABID97_RS27575 | | high-affinity branched-chain amino acid ABC transporter permease LivM | low | > 91 |
Not shown: 31 genomes with orthologs for TX73_012035 only; 12 genomes with orthologs for TX73_019715 only