Conservation of cofitness between TX73_019540 and TX73_018890 in Rhodopseudomonas palustris CGA009

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_019540 FAD-dependent oxidoreductase 1.0 TX73_018890 glycogen debranching protein GlgX 0.52 13
Shewanella loihica PV-4 0.24 Shew_2360 D-hydroxyproline dehydrogenase (from data) 0.47 Shew_1169 glycogen debranching enzyme GlgX (RefSeq) low > 60
Shewanella amazonensis SB2B 0.23 Sama_1533 D-amino-acid dehydrogenase (RefSeq) 0.39 Sama_2452 glycogen operon protein (RefSeq) low > 62
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS22955 D-amino acid dehydrogenase 0.49 HSERO_RS12505 glycogen debranching protein low > 78
Variovorax sp. OAS795 0.16 ABID97_RS22385 D-amino acid dehydrogenase 0.52 ABID97_RS12155 glycogen debranching protein GlgX low > 91
Variovorax sp. SCN45 0.16 GFF1773 D-amino acid dehydrogenase (EC 1.4.99.6) 0.52 GFF770 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) low > 127
Pectobacterium carotovorum WPP14 0.15 HER17_RS11170 D-amino acid dehydrogenase 0.39 HER17_RS01490 glycogen debranching protein GlgX low > 75
Dickeya dianthicola 67-19 0.14 HGI48_RS11195 D-amino acid dehydrogenase 0.38 HGI48_RS19850 glycogen debranching protein GlgX low > 71
Dickeya dadantii 3937 0.14 DDA3937_RS11170 D-amino acid dehydrogenase 0.38 DDA3937_RS19740 glycogen debranching protein GlgX low > 74
Dickeya dianthicola ME23 0.14 DZA65_RS11540 D-amino acid dehydrogenase 0.37 DZA65_RS20925 glycogen debranching protein GlgX low > 75
Escherichia coli ECRC102 0.13 NIAGMN_27930 dadA D-amino acid dehydrogenase 0.38 NIAGMN_14660 glgX glycogen debranching protein GlgX — —
Escherichia coli BL21 0.13 ECD_01164 D-amino acid dehydrogenase 0.38 ECD_03283 glycogen debranching enzyme low > 61
Escherichia coli Nissle 1917 0.13 ECOLIN_RS07185 D-amino acid dehydrogenase 0.38 ECOLIN_RS19635 glycogen debranching protein GlgX — —
Escherichia coli ECRC98 0.13 JDDGAC_06220 dadA D-amino acid dehydrogenase 0.38 JDDGAC_20520 glgX glycogen debranching protein GlgX — —
Escherichia fergusonii Becca 0.13 EFB2_02743 D-amino acid dehydrogenase 0.38 EFB2_00388 Glycogen debranching enzyme low > 86
Escherichia coli BW25113 0.13 b1189 dadA D-amino acid dehydrogenase (quinone) DadA (EC 1.4.5.1) (from data) 0.38 b3431 glgX glycogen debranching enzyme (NCBI) low > 76
Escherichia coli ECRC99 0.13 KEDOAH_25305 dadA D-amino acid dehydrogenase 0.38 KEDOAH_11250 glgX glycogen debranching protein GlgX — —
Escherichia coli ECRC62 0.13 BNILDI_18890 dadA D-amino acid dehydrogenase 0.38 BNILDI_02835 glgX glycogen debranching protein GlgX low > 75
Escherichia coli ECRC101 0.13 MCAODC_21880 dadA D-amino acid dehydrogenase 0.38 MCAODC_07420 glgX glycogen debranching protein GlgX low > 87
Escherichia coli ECOR27 0.13 NOLOHH_20725 dadA D-amino acid dehydrogenase 0.38 NOLOHH_08680 glgX glycogen debranching protein GlgX low > 75
Escherichia coli ECOR38 0.13 HEPCGN_24750 dadA D-amino acid dehydrogenase 0.38 HEPCGN_15705 glgX glycogen debranching protein GlgX low > 87
Escherichia coli ECRC100 0.13 OKFHMN_28290 dadA D-amino acid dehydrogenase 0.38 OKFHMN_16890 glgX glycogen debranching protein GlgX — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_02500 D-amino acid dehydrogenase 0.38 OHPLBJKB_00270 Glycogen debranching enzyme low > 73
Magnetospirillum magneticum AMB-1 0.13 AMB_RS14080 D-amino-acid dehydrogenase 0.54 AMB_RS15425 glycogen debranching enzyme GlgX — —
Serratia liquefaciens MT49 0.12 IAI46_14460 D-amino acid dehydrogenase 0.39 IAI46_23935 glycogen debranching protein GlgX low > 86

Not shown: 56 genomes with orthologs for TX73_019540 only; 1 genomes with orthologs for TX73_018890 only