Conservation of cofitness between PP_4741 and PP_5114 in Pseudomonas putida KT2440

15 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4741 Type I restriction enzyme EcoEI M protein 1.0 PP_5114 putative adenine methyltransferase 0.16 16
Escherichia coli ECOR38 0.68 HEPCGN_09455 hsdM Type I restriction enzyme EcoEI methylase subunit 0.43 HEPCGN_15525 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase low > 87
Escherichia coli ECRC99 0.67 KEDOAH_16730 hsdM Type I restriction enzyme EcoEI methylase subunit 0.43 KEDOAH_11445 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase — —
Escherichia coli ECRC102 0.67 NIAGMN_09265 hsdM Type I restriction enzyme EcoEI methylase subunit 0.43 NIAGMN_14465 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase — —
Escherichia coli ECRC101 0.67 MCAODC_01930 hsdM Type I restriction enzyme EcoEI methylase subunit 0.43 MCAODC_07225 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase low > 87
Escherichia coli ECRC98 0.67 JDDGAC_15010 hsdM Type I restriction enzyme EcoEI methylase subunit 0.43 JDDGAC_20325 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase low > 86
Escherichia coli ECRC100 0.67 OKFHMN_11415 hsdM Type I restriction enzyme EcoEI methylase subunit 0.43 OKFHMN_16695 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase low > 80
Rhodanobacter sp. FW510-T8 0.61 OKGIIK_13995 Site-specific DNA-methyltransferase (adenine-specific) 0.42 OKGIIK_02580 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD low > 52
Castellaniella sp019104865 MT123 0.37 ABCV34_RS05465 class I SAM-dependent DNA methyltransferase 0.33 ABCV34_RS10145 RsmD family RNA methyltransferase low > 48
Pseudomonas sp. RS175 0.18 PFR28_03897 Type I restriction enzyme EcoKI M protein 0.62 PFR28_04262 Ribosomal RNA small subunit methyltransferase D low > 88
Pedobacter sp. GW460-11-11-14-LB5 0.17 CA265_RS20480 restriction endonuclease subunit S 0.18 CA265_RS12725 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD low > 88
Shewanella oneidensis MR-1 0.17 SO4265 hsdM-2 type I restriction-modification system, M subunit (NCBI ptt file) 0.43 SO4587 conserved hypothetical protein TIGR00095 (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.17 Shewana3_2027 N-6 DNA methylase (RefSeq) 0.43 Shewana3_3973 putative methyltransferase (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2E3 0.17 AO353_11435 SAM-dependent methyltransferase 0.61 AO353_08265 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD low > 101
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF1001 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) 0.39 GFF540 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) low > 78
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_3109 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) 0.62 PfGW456L13_990 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) low > 87

Not shown: 3 genomes with orthologs for PP_4741 only; 70 genomes with orthologs for PP_5114 only