Conservation of cofitness between PP_5599 and PP_4341 in Pseudomonas putida KT2440
7 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas putida KT2440 | 1.0 | PP_5599 | | putative transcriptional regulator, LysR family | 1.0 | PP_4341 | | RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons | 0.22 | 15 |
Dyella japonica UNC79MFTsu3.2 | 0.32 | ABZR86_RS14490 | | LysR substrate-binding domain-containing protein | 0.49 | ABZR86_RS20265 | | RNA polymerase sigma factor FliA | low | > 74 |
Sphingomonas koreensis DSMZ 15582 | 0.28 | Ga0059261_0572 | | Transcriptional regulator | 0.24 | Ga0059261_2081 | | RNA polymerase sigma factor, FliA/WhiG family | low | > 68 |
Variovorax sp. SCN45 | 0.28 | GFF1571 | | Transcriptional regulator, LysR family | 0.39 | GFF5774 | | RNA polymerase sigma factor for flagellar operon | low | > 127 |
Paraburkholderia bryophila 376MFSha3.1 | 0.28 | H281DRAFT_06138 | | DNA-binding transcriptional regulator, LysR family | 0.45 | H281DRAFT_05756 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | low | > 103 |
Pseudomonas fluorescens FW300-N1B4 | 0.25 | Pf1N1B4_4588 | | Transcriptional regulator | 0.92 | Pf1N1B4_3626 | | RNA polymerase sigma factor for flagellar operon | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.22 | Psyr_2929 | | transcriptional regulator, LysR family | 0.92 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.22 | Psyr_2929 | | transcriptional regulator, LysR family | 0.92 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | low | > 86 |
Not shown: 2 genomes with orthologs for PP_5599 only; 61 genomes with orthologs for PP_4341 only