Conservation of cofitness between PP_4215 and PP_3803 in Pseudomonas putida KT2440
12 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas putida KT2440 | 1.0 | PP_4215 | | pyoverdine biosynthesis related protein | 1.0 | PP_3803 | | putative Cation ABC transporter, permease protein | 0.27 | 14 |
Pseudomonas fluorescens SBW25 | 0.65 | PFLU_RS12460 | | formylglycine-generating enzyme family protein | 0.85 | PFLU_RS10030 | | metal ABC transporter permease | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.65 | PFLU_RS12460 | | formylglycine-generating enzyme family protein | 0.85 | PFLU_RS10030 | | metal ABC transporter permease | low | > 109 |
Pseudomonas simiae WCS417 | 0.65 | PS417_11715 | | chromophore maturation protein PvdO | 0.85 | PS417_09375 | | zinc ABC transporter permease | — | — |
Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_2386 | | PvdO, pyoverdine responsive serine/threonine kinase (predicted by OlgaV) | 0.85 | PfGW456L13_2304 | | ABC transporter in pyoverdin gene cluster, permease component | low | > 87 |
Pseudomonas syringae pv. syringae B728a | 0.60 | Psyr_1964 | | Protein of unknown function DUF323 | 0.82 | Psyr_1949 | | ABC-3 | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.60 | Psyr_1964 | | Protein of unknown function DUF323 | 0.82 | Psyr_1949 | | ABC-3 | low | > 86 |
Pseudomonas fluorescens FW300-N1B4 | 0.58 | Pf1N1B4_140 | | PvdO, pyoverdine responsive serine/threonine kinase (predicted by OlgaV) | 0.85 | Pf1N1B4_202 | | ABC transporter in pyoverdin gene cluster, permease component | low | > 87 |
Pseudomonas fluorescens FW300-N2E2 | 0.56 | Pf6N2E2_12 | | PvdO, pyoverdine responsive serine/threonine kinase (predicted by OlgaV) | 0.84 | Pf6N2E2_6066 | | ABC transporter in pyoverdin gene cluster, permease component | low | > 103 |
Pseudomonas sp. RS175 | 0.56 | PFR28_02876 | | Formylglycine-generating enzyme | 0.85 | PFR28_02922 | | High-affinity zinc uptake system membrane protein ZnuB | low | > 88 |
Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_21130 | | chromophore maturation protein PvdO | 0.85 | AO356_20890 | | zinc ABC transporter permease | 0.31 | 21 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.23 | GFF4016 | | PvdO, pyoverdine responsive serine/threonine kinase (predicted by OlgaV) | 0.75 | GFF3896 | | ABC transporter in pyoverdin gene cluster, permease component | low | > 90 |
Agrobacterium fabrum C58 | 0.13 | Atu4381 | | nitrite reductase, NirV | 0.16 | Atu4469 | | iron ABC transporter permease | low | > 89 |
Not shown: 4 genomes with orthologs for PP_4215 only; 10 genomes with orthologs for PP_3803 only